EnhancerDB
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  3. rs142150117[chr1:151898829]
Enhancers that have rs142150117[chr1:151898829]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 151885865 151921875 enh624
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs142150117[chr1:151898829]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 151897602 151899108 ZNF143 GTRD no Epithelial (MCF-7) 21338080
chr1 151897711 151899086 ZNF143 GTRD no Epithelial (MCF-7) 21338082
chr1 151897837 151898936 ZNF274 GTRD no Bone Marrow (K562) 21338086
chr1 151898191 151898901 TCF7L2 GTRD no Colon (HCT116) 21338091
chr1 151898437 151899169 GATA3 GTRD no Thymus 21338094
chr1 151898550 151899167 ZNF274 GTRD no Bone Marrow (K562) 21338095
chr1 151898814 151898829 FOXP1 JASPAR yes 32203281
chr1 151898815 151898829 FOXF2 JASPAR yes 32203285
Genes associated with rs142150117[chr1:151898829], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More