EnhancerDB
  1. Home
  2. SNP
  3. rs143890154[chr1:236081559]
Enhancers that have rs143890154[chr1:236081559]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 236062005 236089295 enh12805
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673)
chr1 236081357 236081630 vista5726
VISTA
Transcript factors that have rs143890154[chr1:236081559]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 236081262 236081858 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21403925
chr1 236081262 236081858 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107886241
chr1 236081378 236081608 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107886242
chr1 236081381 236081605 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107886243
chr1 236081405 236081595 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107886244
chr1 236081503 236081743 ZNF274 GTRD no Bone Marrow (K562) 107886245
chr1 236081555 236082068 TCF7L2 GTRD no Colon (HCT116) 21403926
chr1 236081555 236082068 TCF7L2 GTRD no Colon (HCT116) 107886246
Genes associated with rs143890154[chr1:236081559], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More