EnhancerDB
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  3. rs144788482[chr1:235090003]
Enhancers that have rs144788482[chr1:235090003]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 235089980 235090270 vista5665
VISTA
Transcript factors that have rs144788482[chr1:235090003]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235089229 235091514 ZNF274 GTRD no Bone Marrow (K562) 21401110
chr1 235089229 235091514 ZNF274 GTRD no Bone Marrow (K562) 107884472
chr1 235089229 235091514 ZNF274 GTRD no Bone Marrow (K562) 107884473
chr1 235089229 235091514 ZNF274 GTRD no Bone Marrow (K562) 107884474
chr1 235089229 235091514 ZNF274 GTRD no Bone Marrow (K562) 107884475
chr1 235089416 235090100 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21401119
chr1 235089416 235090100 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107884476
chr1 235089532 235090052 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21401131
chr1 235089532 235090052 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107884477
chr1 235089724 235090074 ZNF274 GTRD no Bone Marrow (K562) 21401132
chr1 235089724 235090074 ZNF274 GTRD no Bone Marrow (K562) 107884478
chr1 235089994 235090011 RARA JASPAR yes 36334025
chr1 235089994 235090011 RXRA JASPAR yes 36334026
chr1 235089994 235090011 RARA JASPAR yes 118486148
chr1 235089994 235090011 RXRA JASPAR yes 118486149
Genes associated with rs144788482[chr1:235090003], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More