EnhancerDB
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Enhancers that have rs146033506[chr17:57840217]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57820705 57849586 enh4505
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr17 57839956 57840355 vista25345
VISTA
Transcript factors that have rs146033506[chr17:57840217]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57839743 57840339 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21775477
chr17 57839743 57840339 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108276695
chr17 57839904 57840284 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21775479
chr17 57839904 57840284 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108276697
chr17 57840121 57840565 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108276703
chr17 57840205 57840219 IRF7 JASPAR yes 21265170
chr17 57840205 57840219 IRF7 JASPAR yes 55078953
chr17 57840211 57840221 HOXA13 JASPAR yes 21265172
chr17 57840211 57840221 HOXB13 JASPAR yes 21265173
chr17 57840211 57840221 HOXD13 JASPAR yes 21265174
chr17 57840211 57840221 HOXA13 JASPAR yes 55078955
chr17 57840211 57840221 HOXB13 JASPAR yes 55078956
chr17 57840211 57840221 HOXD13 JASPAR yes 55078957
chr17 57840211 57840222 HOXA10 JASPAR yes 21265175
chr17 57840211 57840222 HOXA10 JASPAR yes 55078958
chr17 57840212 57840221 CDX1 JASPAR yes 21265176
chr17 57840212 57840221 CDX1 JASPAR yes 55078959
chr17 57840212 57840223 CDX2 JASPAR yes 21265177
chr17 57840212 57840223 CDX2 JASPAR yes 55078960
Genes associated with rs146033506[chr17:57840217], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More