EnhancerDB
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Enhancers that have rs183642003[chr17:80829328]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80814305 80837217 enh17458
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Blood (GM12878) Stomach Placenta Colon (HCT116) Breast Uterus Thyroid Pancreas Neural Stem Cells (H9) Heart
chr17 80829054 80829460 vista26487
VISTA
Transcript factors that have rs183642003[chr17:80829328]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80828889 80829485 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21800929
chr17 80828889 80829485 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108313052
chr17 80828933 80829453 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21800931
chr17 80828933 80829453 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108313054
chr17 80829054 80829438 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21800936
chr17 80829054 80829438 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108313059
chr17 80829075 80829385 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21800937
chr17 80829075 80829385 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108313060
chr17 80829176 80829791 TCF7L2 GTRD no Colon (HCT116) 21800942
chr17 80829176 80829791 TCF7L2 GTRD no Colon (HCT116) 108313065
chr17 80829200 80829378 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21800943
chr17 80829200 80829378 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108313066
chr17 80829220 80829858 TCF7L2 GTRD no Colon (HCT116) 21800944
chr17 80829220 80829858 TCF7L2 GTRD no Colon (HCT116) 108313067
chr17 80829310 80829328 MAFF JASPAR yes 21323345
chr17 80829310 80829328 MAFF JASPAR yes 56390115
chr17 80829325 80829338 EOMES JASPAR yes 21323350
chr17 80829325 80829338 EOMES JASPAR yes 56390120
chr17 80829327 80829337 TBR1 JASPAR yes 21323351
chr17 80829327 80829337 TBR1 JASPAR yes 56390121
chr17 80829327 80829338 TBX2 JASPAR yes 21323352
chr17 80829327 80829338 TBX2 JASPAR yes 56390122
chr17 80829328 80829338 TBX21 JASPAR yes 21323353
chr17 80829328 80829338 TBX21 JASPAR yes 56390123
Genes associated with rs183642003[chr17:80829328], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More