EnhancerDB
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  3. rs188819156[chr17:57840292]
Enhancers that have rs188819156[chr17:57840292]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57820705 57849586 enh4505
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr17 57839956 57840355 vista25345
VISTA
Transcript factors that have rs188819156[chr17:57840292]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57839743 57840339 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21775477
chr17 57839743 57840339 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108276695
chr17 57840121 57840565 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108276703
chr17 57840272 57840293 IRF1 JASPAR yes 21265207
chr17 57840272 57840293 IRF1 JASPAR yes 55078990
chr17 57840288 57840292 NFE TRANSFAC yes 21265210
chr17 57840288 57840292 NFE TRANSFAC yes 55078993
chr17 57840288 57840293 GATA1 TRANSFAC yes 21265211
chr17 57840288 57840293 GATA1 TRANSFAC yes 55078994
chr17 57840288 57840294 GATA3 JASPAR yes 21265212
chr17 57840288 57840294 GATA3 JASPAR yes 55078995
chr17 57840292 57840296 NFE TRANSFAC yes 21265213
chr17 57840292 57840296 NFE TRANSFAC yes 55078996
Genes associated with rs188819156[chr17:57840292], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More