EnhancerDB
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  3. rs369678743[chr6:29933954]
Enhancers that have rs369678743[chr6:29933954]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 29930235 29938316 enh9028
Liver Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr6 29933738 29934144 vista51501
VISTA
Transcript factors that have rs369678743[chr6:29933954]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 29932458 29934374 POLR2A UCSC Txn Factor no Conserved 108539442
chr6 29932458 29934374 POLR2A UCSC Txn Factor no Conserved 108539443
chr6 29933639 29934415 TCF7L2 UCSC Txn Factor no Conserved 108539462
chr6 29933939 29933954 FOXP1 JASPAR yes 70342063
chr6 29933939 29933954 FOXP1 JASPAR yes 101018760
chr6 29933940 29933955 FOXP1 JASPAR yes 70342064
chr6 29933940 29933955 FOXP1 JASPAR yes 101018761
chr6 29933941 29933956 FOXP1 JASPAR yes 70342065
chr6 29933941 29933956 FOXP1 JASPAR yes 101018762
chr6 29933941 29933962 IRF1 JASPAR yes 70342066
chr6 29933941 29933962 IRF1 JASPAR yes 101018763
chr6 29933942 29933957 FOXP1 JASPAR yes 70342067
chr6 29933942 29933957 FOXP1 JASPAR yes 101018764
chr6 29933942 29933963 IRF1 JASPAR yes 70342068
chr6 29933942 29933963 IRF1 JASPAR yes 101018765
chr6 29933943 29933958 FOXP1 JASPAR yes 70342069
chr6 29933943 29933958 FOXP1 JASPAR yes 101018766
chr6 29933945 29933960 FOXP1 JASPAR yes 70342070
chr6 29933945 29933960 FOXP1 JASPAR yes 101018767
chr6 29933947 29933962 FOXP1 JASPAR yes 70342071
chr6 29933947 29933962 FOXP1 JASPAR yes 101018768
chr6 29933948 29933969 IRF1 JASPAR yes 70342072
chr6 29933948 29933969 IRF1 JASPAR yes 101018769
chr6 29933950 29933961 FOXP2 JASPAR yes 70342073
chr6 29933950 29933961 FOXP2 JASPAR yes 101018770
chr6 29933952 29933966 SPI1 JASPAR yes 70342074
chr6 29933952 29933966 SPIC JASPAR yes 70342075
chr6 29933952 29933966 SPI1 JASPAR yes 101018771
chr6 29933952 29933966 SPIC JASPAR yes 101018772
chr6 29933953 29933966 ELF1 JASPAR yes 70342076
chr6 29933953 29933966 ELF1 JASPAR yes 101018773
chr6 29933954 29933966 ELF4 JASPAR yes 70342077
chr6 29933954 29933966 ELF4 JASPAR yes 101018774
Genes associated with rs369678743[chr6:29933954], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More