EnhancerDB
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  3. rs528488740[chr16:85276800]
Enhancers that have rs528488740[chr16:85276800]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs528488740[chr16:85276800]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85274014 85278525 TCF7L2 GTRD no Colon (HCT116) 21721830
chr16 85274348 85278275 TCF7L2 GTRD no Colon (HCT116) 21721831
chr16 85274419 85276879 ZNF143 GTRD no Epithelial (MCF-7) 21721837
chr16 85274420 85276823 ZNF143 GTRD no Epithelial (MCF-7) 21721838
chr16 85274420 85278410 ZNF143 GTRD no Epithelial (MCF-7) 21721839
chr16 85274425 85277083 ZNF143 GTRD no Epithelial (MCF-7) 21721840
chr16 85274438 85276888 ZNF143 GTRD no Epithelial (MCF-7) 21721843
chr16 85274472 85278503 TCF7L2 GTRD no Colon (HCT116) 21721846
chr16 85274487 85277002 ZNF274 GTRD no Bone Marrow (K562) 21721847
chr16 85275011 85276878 ZNF143 GTRD no Epithelial (MCF-7) 21721868
chr16 85276103 85276869 ZNF143 GTRD no Epithelial (MCF-7) 21721956
chr16 85276115 85276889 ZNF143 GTRD no Epithelial (MCF-7) 21721957
chr16 85276389 85278368 TCF7L2 GTRD no Colon (HCT116) 21721962
chr16 85276482 85278402 TCF7L2 GTRD no Colon (HCT116) 21721963
chr16 85276568 85277043 TCF7L2 GTRD no Colon (HCT116) 21721964
chr16 85276570 85278109 TCF7L2 GTRD no Colon (HCT116) 21721965
chr16 85276795 85276809 GLIS3 JASPAR yes 12037729
Genes associated with rs528488740[chr16:85276800], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More