EnhancerDB
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  3. rs531109266[chr12:52515872]
Enhancers that have rs531109266[chr12:52515872]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52508085 52522855 enh2356
Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Spleen Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs531109266[chr12:52515872]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52513207 52519034 P63 GTRD no Skin (Keratinocyte) 21546171
chr12 52515598 52515958 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21546193
chr12 52515656 52515946 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21546194
chr12 52515658 52515928 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21546195
chr12 52515659 52515949 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21546196
chr12 52515661 52515895 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21546197
chr12 52515662 52515922 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21546198
chr12 52515664 52517241 AR GTRD no Prostate (PC-3) 21546199
chr12 52515670 52515980 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21546200
chr12 52515674 52515918 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21546201
chr12 52515699 52515880 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21546202
chr12 52515699 52515881 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21546203
chr12 52515703 52515910 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546204
chr12 52515723 52515973 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21546206
chr12 52515759 52515979 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21546208
chr12 52515857 52515872 TFAP2C JASPAR yes 120918989
chr12 52515866 52515878 ZBTB7B JASPAR yes 120918991
chr12 52515868 52515878 ZNF740 JASPAR yes 120918992
chr12 52515870 52515891 ZNF263 JASPAR yes 120918993
chr12 52515871 52515892 ZNF263 JASPAR yes 120918994
Genes associated with rs531109266[chr12:52515872], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More