EnhancerDB
  1. Home
  2. SNP
  3. rs532196975[chr17:48288613]
Enhancers that have rs532196975[chr17:48288613]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48279381 48302635 enh17216
Bone Marrow (K562) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Uterus Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs532196975[chr17:48288613]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48288285 48288838 TCF7L2 GTRD no Colon (HCT116) 108270659
chr17 48288340 48288761 ZNF143 GTRD no Epithelial (MCF-7) 108270660
chr17 48288389 48288820 ZNF143 GTRD no Epithelial (MCF-7) 108270661
chr17 48288594 48288614 TP53 JASPAR yes 54687337
chr17 48288596 48288616 TP63 JASPAR yes 54687338
chr17 48288597 48288615 TP53 JASPAR yes 54687339
chr17 48288597 48288615 TP73 JASPAR yes 54687340
chr17 48288598 48288618 TP53 JASPAR yes 54687341
chr17 48288599 48288614 TP53 JASPAR yes 54687342
chr17 48288601 48288845 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21769634
chr17 48288609 48288613 YY1 TRANSFAC yes 54687344
Genes associated with rs532196975[chr17:48288613], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More