EnhancerDB
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  3. rs534893728[chr17:80829783]
Enhancers that have rs534893728[chr17:80829783]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80814305 80837217 enh17458
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Blood (GM12878) Stomach Placenta Colon (HCT116) Breast Uterus Thyroid Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs534893728[chr17:80829783]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80829176 80829791 TCF7L2 GTRD no Colon (HCT116) 21800942
chr17 80829176 80829791 TCF7L2 GTRD no Colon (HCT116) 108313065
chr17 80829220 80829858 TCF7L2 GTRD no Colon (HCT116) 21800944
chr17 80829220 80829858 TCF7L2 GTRD no Colon (HCT116) 108313067
chr17 80829405 80829853 TCF7L2 GTRD no Colon (HCT116) 21800946
chr17 80829405 80829853 TCF7L2 GTRD no Colon (HCT116) 108313070
Genes associated with rs534893728[chr17:80829783], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More