EnhancerDB
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  3. rs534979232[chr1:234839451]
Enhancers that have rs534979232[chr1:234839451]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234827105 234875936 enh12795
Bone Marrow (K562) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs534979232[chr1:234839451]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234839275 234846237 ZNF274 GTRD no Blood (GM12878) 21395924
chr1 234839298 234840125 ZNF274 GTRD no Bone Marrow (K562) 21395925
chr1 234839309 234840133 ZNF274 GTRD no Cervix (HeLa-S3) 21395926
chr1 234839326 234839734 ZNF274 GTRD no Blood (GM12878) 21395927
chr1 234839335 234840268 ZNF274 GTRD no Cervix (HeLa-S3) 21395928
chr1 234839425 234840627 ZNF143 GTRD no Epithelial (MCF-7) 21395929
chr1 234839438 234839459 ZNF263 JASPAR yes 36304684
chr1 234839438 234840169 ZNF143 GTRD no Epithelial (MCF-7) 21395930
chr1 234839439 234839454 LEF1 JASPAR yes 36304685
chr1 234839449 234839454 GATA2 JASPAR yes 36304687
chr1 234839450 234840551 ZNF143 GTRD no Epithelial (MCF-7) 21395931
Genes associated with rs534979232[chr1:234839451], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More