EnhancerDB
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  3. rs538581198[chr17:57840086]
Enhancers that have rs538581198[chr17:57840086]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57820705 57849586 enh4505
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr17 57839956 57840355 vista25345
VISTA
Transcript factors that have rs538581198[chr17:57840086]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57839743 57840339 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21775477
chr17 57839743 57840339 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108276695
chr17 57839851 57840207 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21775478
chr17 57839851 57840207 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108276696
chr17 57839904 57840284 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21775479
chr17 57839904 57840284 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108276697
chr17 57839912 57840148 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21775480
chr17 57839912 57840148 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108276698
chr17 57839930 57840177 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21775481
chr17 57839930 57840177 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108276699
chr17 57839944 57840132 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21775482
chr17 57839944 57840132 RUNX3 UCSC Txn Factor no Conserved 108276700
chr17 57839944 57840132 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108276701
chr17 57839949 57840141 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108276702
Genes associated with rs538581198[chr17:57840086], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More