EnhancerDB
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  3. rs539102627[chr16:11383539]
Enhancers that have rs539102627[chr16:11383539]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11382725 11409295 enh3884
Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs539102627[chr16:11383539]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11383365 11385739 TCF7L2 GTRD no Colon (HCT116) 108181148
chr16 11383408 11385656 ZNF143 GTRD no Epithelial (MCF-7) 21690352
chr16 11383408 11385656 ZNF143 GTRD no Epithelial (MCF-7) 108181149
Genes associated with rs539102627[chr16:11383539], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More