EnhancerDB
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  3. rs544312583[chr1:236081586]
Enhancers that have rs544312583[chr1:236081586]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 236062005 236089295 enh12805
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673)
chr1 236081357 236081630 vista5726
VISTA
Transcript factors that have rs544312583[chr1:236081586]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 236081262 236081858 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21403925
chr1 236081262 236081858 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107886241
chr1 236081378 236081608 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107886242
chr1 236081381 236081605 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107886243
chr1 236081405 236081595 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107886244
chr1 236081503 236081743 ZNF274 GTRD no Bone Marrow (K562) 107886245
chr1 236081555 236082068 TCF7L2 GTRD no Colon (HCT116) 21403926
chr1 236081555 236082068 TCF7L2 GTRD no Colon (HCT116) 107886246
chr1 236081577 236081597 ESR1 JASPAR yes 36387868
chr1 236081577 236081597 ESR1 JASPAR yes 118489822
chr1 236081580 236081598 ESR2 JASPAR yes 36387869
chr1 236081580 236081598 ESR2 JASPAR yes 118489823
chr1 236081582 236081597 ESR2 JASPAR yes 36387870
chr1 236081582 236081597 ESR2 JASPAR yes 118489824
Genes associated with rs544312583[chr1:236081586], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More