EnhancerDB
  1. Home
  2. SNP
  3. rs546601178[chr11:65236959]
Enhancers that have rs546601178[chr11:65236959]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 65232865 65270235 enh1826
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs546601178[chr11:65236959]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 65235995 65237021 TCF7L2 GTRD no Colon (HCT116) 21493102
chr11 65236161 65237095 ZNF143 GTRD no Epithelial (MCF-7) 21493103
chr11 65236226 65237014 TCF7L2 GTRD no Colon (HCT116) 21493107
chr11 65236825 65237392 ZNF274 GTRD no Bone Marrow (K562) 21493171
chr11 65236899 65237224 ZNF274 GTRD no Bone Marrow (K562) 21493172
chr11 65236950 65237221 ZNF274 GTRD no Bone Marrow (K562) 21493173
Genes associated with rs546601178[chr11:65236959], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More