EnhancerDB
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  3. rs546710198[chr5:172330108]
Enhancers that have rs546710198[chr5:172330108]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr5 172329840 172330200 vista50196
VISTA
Transcript factors that have rs546710198[chr5:172330108]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172329552 172330307 EP300 UCSC Txn Factor no Conserved 108537538
chr5 172329631 172330262 TCF12 UCSC Txn Factor no Conserved 108537539
chr5 172329793 172330304 NR3C1 UCSC Txn Factor no Conserved 108537540
chr5 172329888 172330513 CTCF UCSC Txn Factor no Conserved 108537541
chr5 172329915 172330232 EGR1 UCSC Txn Factor no Conserved 108537542
chr5 172329943 172330235 RAD21 UCSC Txn Factor no Conserved 108537543
Genes associated with rs546710198[chr5:172330108], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More