EnhancerDB
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  3. rs550650895[chr16:85277187]
Enhancers that have rs550650895[chr16:85277187]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs550650895[chr16:85277187]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85274014 85278525 TCF7L2 GTRD no Colon (HCT116) 21721830
chr16 85274348 85278275 TCF7L2 GTRD no Colon (HCT116) 21721831
chr16 85274420 85278410 ZNF143 GTRD no Epithelial (MCF-7) 21721839
chr16 85274472 85278503 TCF7L2 GTRD no Colon (HCT116) 21721846
chr16 85276389 85278368 TCF7L2 GTRD no Colon (HCT116) 21721962
chr16 85276482 85278402 TCF7L2 GTRD no Colon (HCT116) 21721963
chr16 85276570 85278109 TCF7L2 GTRD no Colon (HCT116) 21721965
chr16 85276963 85278383 ZNF143 GTRD no Epithelial (MCF-7) 21721966
chr16 85277092 85278411 ZNF143 GTRD no Epithelial (MCF-7) 21721967
Genes associated with rs550650895[chr16:85277187], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More