EnhancerDB
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  3. rs556153368[chr9:38039990]
Enhancers that have rs556153368[chr9:38039990]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr9 38014305 38054668 enh10763
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr9 38038695 38040099 vista1736
VISTA
Transcript factors that have rs556153368[chr9:38039990]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr9 38039965 38040289 CEBPB UCSC Txn Factor no Conserved 107694223
chr9 38039985 38040000 TFAP2C JASPAR yes 84026463
chr9 38039985 38040000 TFAP2C JASPAR yes 118510923
chr9 38039988 38039999 TFAP2A JASPAR yes 84026464
chr9 38039988 38039999 TFAP2B JASPAR yes 84026465
chr9 38039988 38039999 TFAP2C JASPAR yes 84026466
chr9 38039988 38039999 TFAP2A JASPAR yes 118510924
chr9 38039988 38039999 TFAP2B JASPAR yes 118510925
chr9 38039988 38039999 TFAP2C JASPAR yes 118510926
chr9 38039989 38039998 TFAP2A JASPAR yes 84026467
chr9 38039989 38039998 TFAP2A JASPAR yes 118510927
Genes associated with rs556153368[chr9:38039990], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More