EnhancerDB
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Enhancers that have rs55961439[chr19:1173554]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
Transcript factors that have rs55961439[chr19:1173554]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 1167320 1174938 ZNF274 GTRD no Cervix (HeLa-S3) 21831465
chr19 1167320 1174938 ZNF274 GTRD no Cervix (HeLa-S3) 108350492
chr19 1167320 1174938 ZNF274 GTRD no Cervix (HeLa-S3) 108350493
chr19 1167320 1174938 ZNF274 GTRD no Cervix (HeLa-S3) 108350494
chr19 1167320 1174938 ZNF274 GTRD no Cervix (HeLa-S3) 108350495
chr19 1171118 1174983 TCF7L2 GTRD no Colon (HCT116) 108350692
chr19 1171118 1174983 TCF7L2 GTRD no Colon (HCT116) 108350693
chr19 1171118 1174983 TCF7L2 GTRD no Colon (HCT116) 108350694
chr19 1171244 1174775 ZNF274 GTRD no Bone Marrow (K562) 21831541
chr19 1171244 1174775 ZNF274 GTRD no Bone Marrow (K562) 108350698
chr19 1171244 1174775 ZNF274 GTRD no Bone Marrow (K562) 108350699
chr19 1171250 1174550 ZNF143 GTRD no Epithelial (MCF-7) 21831542
chr19 1171250 1174550 ZNF143 GTRD no Epithelial (MCF-7) 108350700
chr19 1171250 1174550 ZNF143 GTRD no Epithelial (MCF-7) 108350701
chr19 1171252 1174691 TCF7L2 GTRD no Colon (HCT116) 108350702
chr19 1171252 1174691 TCF7L2 GTRD no Colon (HCT116) 108350703
chr19 1171384 1175424 TCF7L2 GTRD no Colon (HCT116) 108350707
chr19 1171384 1175424 TCF7L2 GTRD no Colon (HCT116) 108350708
chr19 1171427 1174756 TCF7L2 GTRD no Colon (HCT116) 108350709
chr19 1171427 1174756 TCF7L2 GTRD no Colon (HCT116) 108350710
chr19 1171702 1174970 ZNF274 GTRD no Cervix (HeLa-S3) 21831543
chr19 1171702 1174970 ZNF274 GTRD no Cervix (HeLa-S3) 108350713
chr19 1171702 1174970 ZNF274 GTRD no Cervix (HeLa-S3) 108350714
chr19 1171744 1173709 ZBTB33 GTRD no Lung (A549) 108350717
chr19 1171744 1173709 ZBTB33 GTRD no Lung (A549) 108350718
chr19 1171768 1174972 ZNF274 GTRD no Blood (GM12878) 108350722
chr19 1171768 1174972 ZNF274 GTRD no Blood (GM12878) 108350723
chr19 1171840 1174880 TCF7L2 GTRD no Colon (HCT116) 108350725
chr19 1171840 1174880 TCF7L2 GTRD no Colon (HCT116) 108350726
chr19 1171981 1174051 ZBTB33 GTRD no Lung (A549) 108350728
chr19 1171981 1174051 ZBTB33 GTRD no Lung (A549) 108350729
chr19 1172160 1175454 TCF7L2 GTRD no Colon (HCT116) 108350732
chr19 1172160 1175454 TCF7L2 GTRD no Colon (HCT116) 108350733
chr19 1172160 1175454 TCF7L2 GTRD no Colon (HCT116) 108350734
chr19 1172257 1174828 ZNF274 GTRD no Liver (HepG2) 108350739
chr19 1172257 1174828 ZNF274 GTRD no Liver (HepG2) 108350740
chr19 1172271 1174631 ZNF274 GTRD no Liver (HepG2) 108350745
chr19 1172271 1174631 ZNF274 GTRD no Liver (HepG2) 108350746
chr19 1172358 1174926 TCF7L2 GTRD no Colon (HCT116) 108350750
chr19 1172388 1174544 ZNF143 GTRD no Epithelial (MCF-7) 21831548
chr19 1172388 1174544 ZNF143 GTRD no Epithelial (MCF-7) 108350753
chr19 1172440 1174961 ZNF274 GTRD no Bone Marrow (K562) 21831551
chr19 1172440 1174961 ZNF274 GTRD no Bone Marrow (K562) 108350756
chr19 1172455 1173679 ZNF274 GTRD no Liver (HepG2) 108350757
chr19 1172514 1174838 ZNF274 GTRD no Liver (HepG2) 108350758
chr19 1172551 1174669 ZNF274 GTRD no Liver (HepG2) 108350759
chr19 1172609 1174668 ZNF274 GTRD no Liver (HepG2) 108350763
chr19 1172692 1173554 ZBTB33 GTRD no Lung (A549) 108350767
chr19 1172716 1174034 ZBTB33 GTRD no Lung (A549) 108350769
chr19 1172718 1174777 ZNF274 GTRD no Liver (HepG2) 108350771
chr19 1172721 1174901 ZNF274 GTRD no Bone Marrow (K562) 21831555
chr19 1172721 1174901 ZNF274 GTRD no Bone Marrow (K562) 108350772
chr19 1172772 1174744 ZNF274 GTRD no Liver (HepG2) 108350779
chr19 1172776 1174773 ZNF274 GTRD no Bone Marrow (K562) 21831560
chr19 1172776 1174773 ZNF274 GTRD no Bone Marrow (K562) 108350781
chr19 1172780 1174906 ZNF274 GTRD no Bone Marrow (K562) 21831562
chr19 1172780 1174906 ZNF274 GTRD no Bone Marrow (K562) 108350784
chr19 1172791 1174887 ZNF274 GTRD no Bone Marrow (K562) 21831563
chr19 1172791 1174887 ZNF274 GTRD no Bone Marrow (K562) 108350787
chr19 1172816 1175871 ZNF274 GTRD no Blood (GM12878) 108350788
chr19 1172816 1175871 ZNF274 GTRD no Blood (GM12878) 108350789
chr19 1172835 1174818 ZNF274 GTRD no Bone Marrow (K562) 21831564
chr19 1172835 1174818 ZNF274 GTRD no Bone Marrow (K562) 108350790
chr19 1172931 1173684 TCF7L2 GTRD no Colon (HCT116) 108350793
chr19 1172977 1175884 ZNF274 GTRD no Blood (GM12878) 108350794
chr19 1172977 1175884 ZNF274 GTRD no Blood (GM12878) 108350795
chr19 1173006 1174920 TCF7L2 GTRD no Colon (HCT116) 108350799
chr19 1173015 1174011 ZNF274 GTRD no Bone Marrow (K562) 21831568
chr19 1173015 1174011 ZNF274 GTRD no Bone Marrow (K562) 108350801
chr19 1173015 1174872 ZNF274 GTRD no Bone Marrow (K562) 21831569
chr19 1173015 1174872 ZNF274 GTRD no Bone Marrow (K562) 108350802
chr19 1173024 1173686 ZNF274 GTRD no Bone Marrow (K562) 21831570
chr19 1173024 1173686 ZNF274 GTRD no Bone Marrow (K562) 108350803
chr19 1173029 1175879 ZNF274 GTRD no Blood (GM12878) 108350804
chr19 1173029 1175879 ZNF274 GTRD no Blood (GM12878) 108350805
chr19 1173031 1173932 ZNF274 GTRD no Liver (HepG2) 108350806
chr19 1173060 1174023 ZNF274 GTRD no Blood (GM12878) 108350807
chr19 1173080 1173840 ZNF274 GTRD no Blood (GM12878) 108350808
chr19 1173095 1173591 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21831571
chr19 1173095 1173591 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108350809
chr19 1173101 1174563 ZNF274 GTRD no Liver (HepG2) 108350810
chr19 1173105 1175935 ZNF274 GTRD no Blood (GM12878) 108350811
chr19 1173105 1175935 ZNF274 GTRD no Blood (GM12878) 108350812
chr19 1173111 1174738 TCF7L2 GTRD no Colon (HCT116) 108350813
chr19 1173121 1174768 ZNF274 GTRD no Bone Marrow (K562) 21831572
chr19 1173121 1174768 ZNF274 GTRD no Bone Marrow (K562) 108350814
chr19 1173137 1174455 TCF7L2 GTRD no Colon (HCT116) 108350815
chr19 1173197 1174043 ZNF274 GTRD no Bone Marrow (K562) 21831573
chr19 1173197 1174043 ZNF274 GTRD no Bone Marrow (K562) 108350816
chr19 1173198 1173672 ZNF274 GTRD no Bone Marrow (K562) 21831574
chr19 1173198 1173672 ZNF274 GTRD no Bone Marrow (K562) 108350817
chr19 1173206 1173978 ZNF274 GTRD no Blood (GM12878) 108350818
chr19 1173210 1173917 ZNF274 GTRD no Blood (GM12878) 108350819
chr19 1173210 1174704 ZNF274 GTRD no Bone Marrow (K562) 21831575
chr19 1173210 1174704 ZNF274 GTRD no Bone Marrow (K562) 108350820
chr19 1173246 1173682 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108350821
chr19 1173284 1174567 ZNF143 GTRD no Epithelial (MCF-7) 21831576
chr19 1173317 1174063 ZNF143 GTRD no Epithelial (MCF-7) 21831577
Genes associated with rs55961439[chr19:1173554], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More