EnhancerDB
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Enhancers that have rs560846174[chr1:212458645]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212456045 212470579 enh910
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Colon (HCT116) Uterus Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Neural Stem Cells (H9) Stomach
Transcript factors that have rs560846174[chr1:212458645]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212455337 212458699 ZNF274 GTRD no Cervix (HeLa-S3) 21378634
chr1 212455337 212458699 ZNF274 GTRD no Cervix (HeLa-S3) 107867931
chr1 212457260 212459272 ZNF274 GTRD no Cervix (HeLa-S3) 21378638
chr1 212457260 212459272 ZNF274 GTRD no Cervix (HeLa-S3) 107867936
chr1 212457563 212459541 ZNF274 GTRD no Bone Marrow (K562) 21378649
chr1 212457563 212459541 ZNF274 GTRD no Bone Marrow (K562) 107867952
chr1 212457691 212460251 POLR2A UCSC Txn Factor no Conserved 107867982
chr1 212457985 212458669 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21378699
chr1 212457985 212458669 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107868036
chr1 212458105 212458715 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21378741
chr1 212458105 212458715 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107868083
chr1 212458116 212458712 FOS UCSC Txn Factor no Conserved 107868086
chr1 212458229 212459237 ZNF274 GTRD no Bone Marrow (K562) 21378762
chr1 212458229 212459237 ZNF274 GTRD no Bone Marrow (K562) 107868107
chr1 212458232 212458832 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21378763
chr1 212458232 212458832 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107868108
chr1 212458233 212458894 ZNF274 GTRD no Bone Marrow (K562) 21378764
chr1 212458233 212458894 ZNF274 GTRD no Bone Marrow (K562) 107868109
chr1 212458645 212458650 SP1 TRANSFAC yes 35117737
Genes associated with rs560846174[chr1:212458645], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More