EnhancerDB
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  3. rs56220789[chr15:101733082]
Enhancers that have rs56220789[chr15:101733082]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 101726845 101770455 enh16480
Liver Astrocyte Colon (HCT116) Adrenal Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs56220789[chr15:101733082]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 101732714 101734603 ZNF274 GTRD no Bone Marrow (K562) 108169324
chr15 101732720 101734106 ZNF274 GTRD no Bone Marrow (K562) 108169325
chr15 101733053 101734074 ZNF274 GTRD no Bone Marrow (K562) 108169326
chr15 101733073 101733086 SMAD2 JASPAR yes 25977243
Genes associated with rs56220789[chr15:101733082], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More