EnhancerDB
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  3. rs562522030[chr16:85241085]
Enhancers that have rs562522030[chr16:85241085]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs562522030[chr16:85241085]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85239834 85241511 ZNF143 GTRD no Epithelial (MCF-7) 21721148
chr16 85240036 85241490 TCF7L2 GTRD no Colon (HCT116) 21721153
chr16 85240143 85242565 TCF7L2 GTRD no Colon (HCT116) 21721156
chr16 85240835 85241654 ZNF274 GTRD no Blood (GM12878) 21721160
chr16 85240895 85241654 ZNF274 GTRD no Blood (GM12878) 21721161
chr16 85241050 85241747 ZNF274 GTRD no Bone Marrow (K562) 21721162
chr16 85241058 85241663 ZNF274 GTRD no Blood (GM12878) 21721163
chr16 85241079 85241091 NHLH1 JASPAR yes 12032690
Genes associated with rs562522030[chr16:85241085], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More