EnhancerDB
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  3. rs562552293[chr15:101733365]
Enhancers that have rs562552293[chr15:101733365]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 101726845 101770455 enh16480
Liver Astrocyte Colon (HCT116) Adrenal Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs562552293[chr15:101733365]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 101732714 101734603 ZNF274 GTRD no Bone Marrow (K562) 108169324
chr15 101732720 101734106 ZNF274 GTRD no Bone Marrow (K562) 108169325
chr15 101733053 101734074 ZNF274 GTRD no Bone Marrow (K562) 108169326
chr15 101733136 101734370 ZNF274 GTRD no Bone Marrow (K562) 108169327
chr15 101733266 101734155 ZNF274 GTRD no Bone Marrow (K562) 108169328
chr15 101733354 101733367 SMAD2 JASPAR yes 25977281
Genes associated with rs562552293[chr15:101733365], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More