EnhancerDB
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  3. rs566373236[chr16:85425370]
Enhancers that have rs566373236[chr16:85425370]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85422125 85439595 enh4173
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Stomach Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs566373236[chr16:85425370]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85416815 85425751 ZNF143 GTRD no Epithelial (MCF-7) 21724644
chr16 85416815 85425751 ZNF143 GTRD no Epithelial (MCF-7) 21724645
chr16 85416815 85425751 ZNF143 GTRD no Epithelial (MCF-7) 108214247
chr16 85416815 85425751 ZNF143 GTRD no Epithelial (MCF-7) 108214248
chr16 85418047 85425742 ZNF143 GTRD no Epithelial (MCF-7) 21724657
chr16 85418047 85425742 ZNF143 GTRD no Epithelial (MCF-7) 21724658
chr16 85418047 85425742 ZNF143 GTRD no Epithelial (MCF-7) 108214251
chr16 85418047 85425742 ZNF143 GTRD no Epithelial (MCF-7) 108214252
chr16 85418047 85425775 ZNF143 GTRD no Epithelial (MCF-7) 21724659
chr16 85418047 85425775 ZNF143 GTRD no Epithelial (MCF-7) 21724660
chr16 85418047 85425775 ZNF143 GTRD no Epithelial (MCF-7) 108214253
chr16 85418047 85425775 ZNF143 GTRD no Epithelial (MCF-7) 108214254
chr16 85420327 85425759 TCF7L2 GTRD no Colon (HCT116) 21724731
chr16 85420327 85425759 TCF7L2 GTRD no Colon (HCT116) 108214266
chr16 85421249 85425869 TCF7L2 GTRD no Colon (HCT116) 21724792
chr16 85421249 85425869 TCF7L2 GTRD no Colon (HCT116) 108214267
chr16 85423810 85425719 ZNF274 GTRD no Bone Marrow (K562) 21724870
chr16 85423810 85425719 ZNF274 GTRD no Bone Marrow (K562) 108214271
chr16 85424463 85425406 TCF7L2 GTRD no Colon (HCT116) 21724911
chr16 85424463 85425406 TCF7L2 GTRD no Colon (HCT116) 108214329
chr16 85424887 85425718 TCF7L2 GTRD no Colon (HCT116) 21724914
chr16 85424926 85425781 TCF7L2 GTRD no Colon (HCT116) 21724915
chr16 85425201 85425714 TCF7L2 GTRD no Colon (HCT116) 21724916
chr16 85425212 85425760 ZNF143 GTRD no Epithelial (MCF-7) 21724917
chr16 85425298 85425588 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21724918
chr16 85425338 85425528 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21724919
chr16 85425366 85425377 ESRRA JASPAR yes 12056104
chr16 85425366 85425377 ESRRB JASPAR yes 12056105
chr16 85425366 85425379 NR2F1 JASPAR yes 12056106
chr16 85425368 85425376 NR4A2 JASPAR yes 12056107
chr16 85425370 85425374 ESR1 TRANSFAC yes 12056108
Genes associated with rs566373236[chr16:85425370], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More