EnhancerDB
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  3. rs575730108[chr1:229366662]
Enhancers that have rs575730108[chr1:229366662]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229351665 229369695 enh12764
Liver Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Heart
chr1 229366402 229366798 vista5464
VISTA
Transcript factors that have rs575730108[chr1:229366662]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229366131 229366707 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107878012
chr1 229366201 229366797 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107878013
chr1 229366209 229366749 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107878014
chr1 229366329 229366669 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21390858
chr1 229366329 229366669 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107878019
chr1 229366368 229366678 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107878021
chr1 229366371 229366867 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21390860
chr1 229366371 229366867 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107878022
chr1 229366387 229366667 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107878025
chr1 229366402 229366662 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107878027
chr1 229366476 229366806 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107878032
Genes associated with rs575730108[chr1:229366662], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More