EnhancerDB
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  3. rs59954524[chr16:11384136]
Enhancers that have rs59954524[chr16:11384136]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11382725 11409295 enh3884
Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs59954524[chr16:11384136]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11383365 11385739 TCF7L2 GTRD no Colon (HCT116) 108181148
chr16 11383408 11385656 ZNF143 GTRD no Epithelial (MCF-7) 21690352
chr16 11383408 11385656 ZNF143 GTRD no Epithelial (MCF-7) 108181149
chr16 11383544 11385698 ZNF143 GTRD no Epithelial (MCF-7) 21690353
chr16 11383544 11385698 ZNF143 GTRD no Epithelial (MCF-7) 108181150
chr16 11383551 11385682 TCF7L2 GTRD no Colon (HCT116) 108181151
chr16 11383642 11385299 TCF7L2 GTRD no Colon (HCT116) 108181152
chr16 11383740 11384556 ZNF274 GTRD no Bone Marrow (K562) 108181153
Genes associated with rs59954524[chr16:11384136], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More