EnhancerDB
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  3. rs61512280[chr19:13956870]
Enhancers that have rs61512280[chr19:13956870]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs61512280[chr19:13956870]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13955484 13956974 ZNF143 GTRD no Epithelial (MCF-7) 21852246
chr19 13955484 13956974 ZNF143 GTRD no Epithelial (MCF-7) 108390191
chr19 13956571 13956908 ZNF274 GTRD no Bone Marrow (K562) 21852263
chr19 13956858 13956873 LEF1 JASPAR yes 112537589
chr19 13956867 13956887 RREB1 JASPAR yes 112537591
chr19 13956868 13956889 IRF1 JASPAR yes 112537592
chr19 13956869 13956884 FOXP1 JASPAR yes 112537593
Genes associated with rs61512280[chr19:13956870], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More