EnhancerDB
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  3. rs6919102[chr6:29933654]
Enhancers that have rs6919102[chr6:29933654]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 29930235 29938316 enh9028
Liver Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs6919102[chr6:29933654]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 29932458 29934374 POLR2A UCSC Txn Factor no Conserved 108539442
chr6 29932458 29934374 POLR2A UCSC Txn Factor no Conserved 108539443
chr6 29933638 29933656 SRF JASPAR yes 101018735
chr6 29933639 29934415 TCF7L2 UCSC Txn Factor no Conserved 108539462
chr6 29933653 29933667 SPI1 JASPAR yes 101018736
chr6 29933653 29933667 SPIC JASPAR yes 101018737
Genes associated with rs6919102[chr6:29933654], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More