EnhancerDB
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  3. rs72840522[chr17:57829992]
Enhancers that have rs72840522[chr17:57829992]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57820705 57849586 enh4505
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr17 57829892 57830070 vista25340
VISTA
Transcript factors that have rs72840522[chr17:57829992]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57829984 57829992 MEIS2 JASPAR yes 21264771
chr17 57829984 57829992 MEIS3 JASPAR yes 21264772
chr17 57829984 57829992 MEIS2 JASPAR yes 55077163
chr17 57829984 57829992 MEIS3 JASPAR yes 55077164
chr17 57829987 57829997 GABPA JASPAR yes 21264773
chr17 57829987 57829997 GABPA JASPAR yes 55077165
chr17 57829987 57830005 NR3C1 JASPAR yes 21264774
chr17 57829987 57830005 NR3C1 JASPAR yes 55077166
Genes associated with rs72840522[chr17:57829992], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More