EnhancerDB
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  3. rs74142355[chr1:229366730]
Enhancers that have rs74142355[chr1:229366730]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229351665 229369695 enh12764
Liver Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Heart
chr1 229366402 229366798 vista5464
VISTA
Transcript factors that have rs74142355[chr1:229366730]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229366201 229366797 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107878013
chr1 229366209 229366749 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107878014
chr1 229366371 229366867 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21390860
chr1 229366371 229366867 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107878022
chr1 229366476 229366806 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107878032
chr1 229366711 229366732 IRF1 JASPAR yes 35977721
chr1 229366711 229366732 IRF1 JASPAR yes 118476213
chr1 229366717 229366732 FOXP1 JASPAR yes 35977724
chr1 229366717 229366732 MEF2C JASPAR yes 35977725
chr1 229366717 229366732 FOXP1 JASPAR yes 118476216
chr1 229366717 229366732 MEF2C JASPAR yes 118476217
chr1 229366717 229366738 IRF1 JASPAR yes 35977726
chr1 229366717 229366738 IRF1 JASPAR yes 118476218
chr1 229366718 229366733 MEF2A JASPAR yes 35977727
chr1 229366718 229366733 MEF2A JASPAR yes 118476219
chr1 229366718 229366739 IRF1 JASPAR yes 35977728
chr1 229366718 229366739 IRF1 JASPAR yes 118476220
chr1 229366719 229366731 FOXC2 JASPAR yes 35977729
chr1 229366719 229366731 MEF2A JASPAR yes 35977730
chr1 229366719 229366731 MEF2B JASPAR yes 35977731
chr1 229366719 229366731 MEF2D JASPAR yes 35977732
chr1 229366719 229366731 FOXC2 JASPAR yes 118476221
chr1 229366719 229366731 MEF2A JASPAR yes 118476222
chr1 229366719 229366731 MEF2B JASPAR yes 118476223
chr1 229366719 229366731 MEF2D JASPAR yes 118476224
chr1 229366720 229366730 MEF2A JASPAR yes 35977733
chr1 229366720 229366730 MEF2A JASPAR yes 118476225
chr1 229366722 229366734 IRF1 JASPAR yes 35977734
chr1 229366722 229366734 IRF1 JASPAR yes 118476226
chr1 229366722 229366737 STAT2 JASPAR yes 35977735
chr1 229366722 229366737 STAT2 JASPAR yes 118476227
chr1 229366728 229366748 RREB1 JASPAR yes 35977736
chr1 229366728 229366748 RREB1 JASPAR yes 118476228
chr1 229366729 229366744 RUNX2 JASPAR yes 35977737
chr1 229366729 229366744 RUNX2 JASPAR yes 118476229
chr1 229366730 229366739 RUNX2 JASPAR yes 35977738
chr1 229366730 229366739 RUNX2 JASPAR yes 118476230
chr1 229366730 229366740 RUNX3 JASPAR yes 35977739
chr1 229366730 229366740 RUNX3 JASPAR yes 118476231
chr1 229366730 229366750 RREB1 JASPAR yes 35977740
chr1 229366730 229366750 RREB1 JASPAR yes 118476232
Genes associated with rs74142355[chr1:229366730], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More