EnhancerDB
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  3. rs7546936[chr1:8198309]
Enhancers that have rs7546936[chr1:8198309]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8164245 8205415 enh11462
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
chr1 8198088 8198334 vista230
VISTA
Transcript factors that have rs7546936[chr1:8198309]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8196493 8199056 ZNF274 GTRD no Bone Marrow (K562) 107801957
chr1 8198288 8198309 IRF1 JASPAR yes 26518220
chr1 8198288 8198309 IRF1 JASPAR yes 118224190
chr1 8198306 8198321 MEF2C JASPAR yes 26518222
chr1 8198306 8198321 MEF2C JASPAR yes 118224192
chr1 8198307 8198322 MEF2A JASPAR yes 26518223
chr1 8198307 8198322 MEF2A JASPAR yes 118224193
chr1 8198308 8198320 MEF2A JASPAR yes 26518224
chr1 8198308 8198320 MEF2B JASPAR yes 26518225
chr1 8198308 8198320 MEF2D JASPAR yes 26518226
chr1 8198308 8198320 MEF2A JASPAR yes 118224194
chr1 8198308 8198320 MEF2B JASPAR yes 118224195
chr1 8198308 8198320 MEF2D JASPAR yes 118224196
chr1 8198309 8198319 MEF2A JASPAR yes 26518227
chr1 8198309 8198319 MEF2A JASPAR yes 118224197
Genes associated with rs7546936[chr1:8198309], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More