EnhancerDB
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  3. rs7607559[chr2:238578307]
Enhancers that have rs7607559[chr2:238578307]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238567229 238591955 enh19400
Brain (SK-N-MC) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 238578306 238578453 vista35419
VISTA
Transcript factors that have rs7607559[chr2:238578307]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238578182 238578461 PAX5 UCSC Txn Factor no Conserved 108435935
chr2 238578213 238578531 RUNX3 UCSC Txn Factor no Conserved 108435936
chr2 238578213 238578531 RUNX3 UCSC Txn Factor no Conserved 108435937
chr2 238578301 238578318 PAX1 JASPAR yes 22242061
chr2 238578301 238578318 PAX9 JASPAR yes 22242062
chr2 238578301 238578318 PAX1 JASPAR yes 82130022
chr2 238578301 238578318 PAX9 JASPAR yes 82130023
chr2 238578302 238578321 PAX5 JASPAR yes 22242063
chr2 238578302 238578321 PAX5 JASPAR yes 82130024
Genes associated with rs7607559[chr2:238578307], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More