EnhancerDB
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  3. rs7769998[chr6:29933964]
Enhancers that have rs7769998[chr6:29933964]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 29930235 29938316 enh9028
Liver Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr6 29933738 29934144 vista51501
VISTA
Transcript factors that have rs7769998[chr6:29933964]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 29932458 29934374 POLR2A UCSC Txn Factor no Conserved 108539442
chr6 29932458 29934374 POLR2A UCSC Txn Factor no Conserved 108539443
chr6 29933639 29934415 TCF7L2 UCSC Txn Factor no Conserved 108539462
chr6 29933948 29933969 IRF1 JASPAR yes 70342072
chr6 29933948 29933969 IRF1 JASPAR yes 101018769
chr6 29933952 29933966 SPI1 JASPAR yes 70342074
chr6 29933952 29933966 SPIC JASPAR yes 70342075
chr6 29933952 29933966 SPI1 JASPAR yes 101018771
chr6 29933952 29933966 SPIC JASPAR yes 101018772
chr6 29933953 29933966 ELF1 JASPAR yes 70342076
chr6 29933953 29933966 ELF1 JASPAR yes 101018773
chr6 29933954 29933966 ELF4 JASPAR yes 70342077
chr6 29933954 29933966 ELF4 JASPAR yes 101018774
chr6 29933956 29933966 GABPA JASPAR yes 70342078
chr6 29933956 29933966 GABPA JASPAR yes 101018775
chr6 29933956 29933967 FLI1 JASPAR yes 70342079
chr6 29933956 29933967 FLI1 JASPAR yes 101018776
chr6 29933957 29933965 EHF JASPAR yes 70342080
chr6 29933957 29933965 EHF JASPAR yes 101018777
chr6 29933963 29933969 MAZ TRANSFAC yes 70342081
chr6 29933963 29933969 MAZ TRANSFAC yes 101018778
Genes associated with rs7769998[chr6:29933964], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More