EnhancerDB
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  3. rs78036096[chr1:235090053]
Enhancers that have rs78036096[chr1:235090053]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 235089980 235090270 vista5665
VISTA
Transcript factors that have rs78036096[chr1:235090053]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235089229 235091514 ZNF274 GTRD no Bone Marrow (K562) 21401110
chr1 235089229 235091514 ZNF274 GTRD no Bone Marrow (K562) 107884472
chr1 235089229 235091514 ZNF274 GTRD no Bone Marrow (K562) 107884473
chr1 235089229 235091514 ZNF274 GTRD no Bone Marrow (K562) 107884474
chr1 235089229 235091514 ZNF274 GTRD no Bone Marrow (K562) 107884475
chr1 235089416 235090100 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21401119
chr1 235089416 235090100 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107884476
chr1 235089724 235090074 ZNF274 GTRD no Bone Marrow (K562) 21401132
chr1 235089724 235090074 ZNF274 GTRD no Bone Marrow (K562) 107884478
chr1 235090048 235090062 PLAG1 JASPAR yes 36334028
chr1 235090048 235090062 PLAG1 JASPAR yes 118486151
chr1 235090049 235090058 HIC2 JASPAR yes 36334029
chr1 235090049 235090058 HIC2 JASPAR yes 118486152
chr1 235090050 235090062 TFAP2A JASPAR yes 36334030
chr1 235090050 235090062 TFAP2B JASPAR yes 36334031
chr1 235090050 235090062 TFAP2C JASPAR yes 36334032
chr1 235090050 235090062 TFAP2A JASPAR yes 118486153
chr1 235090050 235090062 TFAP2B JASPAR yes 118486154
chr1 235090050 235090062 TFAP2C JASPAR yes 118486155
chr1 235090050 235090065 TFAP2A JASPAR yes 36334033
chr1 235090050 235090065 TFAP2A JASPAR yes 118486156
Genes associated with rs78036096[chr1:235090053], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More