EnhancerDB
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Enhancers that regulate KDM1A[ENSG00000004487.11]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 23296165 23312635 enh26580 23345941 33306
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Muscle (A673) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1)
chr1 23321165 23326355 enh108310 23345941 19586
Cervix (HeLa-S3) Lung (PC-9)
chr1 23328385 23332735 enh78977 23345941 13206
Prostate (PC-3)
chr1 23335094 23339758 enh89466 23345941 6183
Prostate (RWPE1)
chr1 23351183 23369275 enh124 23345941 5242
Liver (HepG2) Prostate (RWPE1) Astrocyte Blood (GM12878) Muscle (A673) Blood (Karpas-422)
chr1 23357547 23357765 vista728 23345941 11606
VISTA
chr1 23387365 23391515 enh49681 23345941 41424
Large Intestine
chr1 23387479 23387794 vista729 23345941 41538
VISTA
chr1 23421969 23432217 enh11605 23345941 76028
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 23426690 23427100 vista730 23345941 80749
VISTA
chr1 23429944 23430077 vista731 23345941 84003
VISTA
chr1 23435285 23459230 enh11606 23345941 89344
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Thyroid Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
chr1 23445594 23445963 vista732 23345941 99653
VISTA
Transcript facotrs that regulate KDM1A[ENSG00000004487.11]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with KDM1A[ENSG00000004487.11], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 23794171 rs149819319 G A 383989 Esophagus 0.217448 158854
chr1 23497315 rs856511 T C 87133 Heart 0.063665 157046
chr1 23162743 rs113734150 G A,C,T 183198 Ovary 0.00316762 155209
chr1 23489956 rs76531202 G A 79774 Thyroid 0.00065285 156989
chr1 22701995 rs147378920 A G 643946 Liver 0.464426 151831
chr1 23730504 rs61777156 C A 320322 Lung 0.0156092 158541
Details of KDM1A[ENSG00000004487.11]
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Genomic Location chr1:23345941-23410182[+]
TSS 23345941
Gene Name KDM1A
Ensembl ID ENSG00000004487.11
ENTREZID 23028
Uniprot
O60341
Protein Name
Lysine-specific histone demethylase 1A
Expression levels of KDM1A[ENSG00000004487.11]
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