EnhancerDB
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Enhancers that regulate SPATA20[ENSG00000006282.15]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 48515685 48532515 enh17219 48620419 87904
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Stomach Muscle (A673) Placenta Thyroid Lung (PC-9) Pancreas Epithelial (MCF-7)
chr17 48533125 48537275 enh81218 48620419 83144
Prostate (PC-3)
chr17 48553725 48559075 enh99431 48620419 61344
Uterus
chr17 48569165 48580715 enh86256 48620419 39704
Stomach Colon (HCT116) Cervix (HeLa-S3) Lung (PC-9)
chr17 48581185 48591275 enh17220 48620419 29144
Placenta
chr17 48639545 48645615 enh17221 48620419 19126
Ovary Muscle (A673) Placenta Uterus Stomach
chr17 48642446 48642840 vista25116 48620419 22027
VISTA
chr17 48647987 48648149 vista25117 48620419 27568
VISTA
chr17 48658182 48667295 enh65051 48620419 37763
Thyroid Brain (SK-N-SH) Heart
chr17 48710151 48710394 vista25118 48620419 89732
VISTA
chr17 48713385 48720742 enh17222 48620419 92966
Astrocyte Adrenal Pancreas Uterus Stomach Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Muscle (A673)
chr17 48716257 48716537 vista25119 48620419 95838
VISTA
chr17 48716691 48717083 vista25120 48620419 96272
VISTA
Transcript facotrs that regulate SPATA20[ENSG00000006282.15]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with SPATA20[ENSG00000006282.15], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 48624523 rs9890200 A C 0 Esophagus 1.63866e-99 4923939
chr17 48624523 rs9890200 A C 0 Esophagus 6.81954e-38 4923939
chr17 48624523 rs9890200 A C 0 Heart 3.43439e-46 4923939
chr17 48624523 rs9890200 A C 0 Heart 4.42783e-49 4923939
chr17 48624523 rs9890200 A C 0 Pancreas 1.10662e-26 4923939
chr17 48624523 rs9890200 A C 0 Breast 6.43119e-47 4923939
chr17 48624523 rs9890200 A C 0 Spleen 1.40423e-44 4923939
chr17 48624523 rs9890200 A C 0 Ovary 1.12484e-10 4923939
chr17 48624523 rs9890200 A C 0 Uterus 3.45194e-11 4923939
chr17 48624523 rs9890200 A C 0 Thyroid 4.27813e-69 4923939
chr17 48624523 rs9890200 A C 0 Stomach 1.1578e-31 4923939
chr17 48624523 rs9890200 A C 0 Adrenal 9.86008e-28 4923939
Details of SPATA20[ENSG00000006282.15]
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Genomic Location chr17:48620419-48633213[+]
TSS 48620419
Gene Name SPATA20
Ensembl ID ENSG00000006282.15
ENTREZID 64847
Uniprot
Q8TB22
Protein Name
Epididymis secretory protein Li 98
Spermatogenesis-associated protein 20
Expression levels of SPATA20[ENSG00000006282.15]
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