EnhancerDB
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Enhancers that regulate ERCC1[ENSG00000012061.11]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr19 45877665 45882395 enh32959 45982086 99691
Astrocyte Prostate (PC-3)
chr19 45905744 45905944 vista29593 45982086 76142
VISTA
chr19 45906934 45907335 vista29594 45982086 74751
VISTA
chr19 45920845 45924995 enh5169 45982086 57091
Blood (Karpas-422)
chr19 45925514 45929982 enh102611 45982086 52104
Bone (Osteoblast)
chr19 45931993 45932316 vista29595 45982086 49770
VISTA
chr19 45940563 45951807 enh5170 45982086 30279
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Thymus
chr19 45943163 45943490 vista29596 45982086 38596
VISTA
chr19 45944272 45944469 vista29597 45982086 37617
VISTA
chr19 45945937 45946679 vista29598 45982086 35407
VISTA
chr19 45946690 45947113 vista29599 45982086 34973
VISTA
chr19 45952039 45952594 vista29600 45982086 29492
VISTA
chr19 45953045 45961795 enh18105 45982086 20291
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myotube) Liver (HepG2) Heart
chr19 45953262 45953678 vista29601 45982086 28408
VISTA
chr19 45953764 45954783 vista29602 45982086 27303
VISTA
chr19 45954905 45955186 vista29603 45982086 26900
VISTA
chr19 45959420 45959846 vista29604 45982086 22240
VISTA
chr19 45968349 45968608 vista29605 45982086 13478
VISTA
chr19 45980345 45980732 vista29606 45982086 1354
VISTA
chr19 45987073 45987327 vista29607 45982086 4987
VISTA
chr19 45995542 45995743 vista29608 45982086 13456
VISTA
chr19 45999277 45999601 vista29609 45982086 17191
VISTA
chr19 46011701 46012269 vista29610 45982086 29615
VISTA
chr19 46012498 46012899 vista29611 45982086 30412
VISTA
chr19 46013645 46020716 enh5171 45982086 31559
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Bone (Osteoblast) Lung (A549) Placenta Blood (Karpas-422) Lung (PC-9) Blood (T-cell)
chr19 46014236 46014617 vista29612 45982086 32150
VISTA
chr19 46018095 46018753 vista29613 45982086 36009
VISTA
chr19 46022243 46026517 enh86326 45982086 40157
Colon (HCT116)
chr19 46036145 46041255 enh108728 45982086 54059
Lung (PC-9)
chr19 46043565 46049535 enh5172 45982086 61479
Prostate (PC-3) Prostate (RWPE1) Esophagus Blood (OCI-LY7) Blood (Karpas-422)
chr19 46058172 46075575 enh5173 45982086 76086
Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
chr19 46076605 46087095 enh18106 45982086 94519
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Placenta Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Muscle (Myotube) Heart
Transcript facotrs that regulate ERCC1[ENSG00000012061.11]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr19 45980254 45980552 ZNF274 GTRD no Bone Marrow (K562) 45982086 1534 108416777
chr19 45980397 45980401 TEAD2 TRANSFAC yes 45982086 1685 70858310
chr19 45980398 45980409 FOXB1 JASPAR yes 45982086 1677 70858311
chr19 45980430 45980445 TFAP2A JASPAR yes 45982086 1641 70858312
chr19 45980430 45980445 TFAP2C JASPAR yes 45982086 1641 70858313
chr19 45980436 45980457 REST JASPAR yes 45982086 1629 70858314
chr19 45980440 45980444 LFA1 TRANSFAC yes 45982086 1642 70858315
chr19 45980446 45980451 TFAP2A TRANSFAC yes 45982086 1635 70858316
chr19 45980446 45980452 MZF1 JASPAR yes 45982086 1634 70858317
chr19 45980450 45980466 SOX4 JASPAR yes 45982086 1620 70858318
chr19 45980477 45980487 SP1 JASPAR yes 45982086 1599 70858319
chr19 45980477 45980494 RXRA JASPAR yes 45982086 1592 70858320
chr19 45980478 45980482 LFA1 TRANSFAC yes 45982086 1604 70858321
chr19 45980480 45980684 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 45982086 1402 108416778
chr19 45980484 45980488 LFA1 TRANSFAC yes 45982086 1598 70858322
chr19 45980501 45980512 NFKB1 JASPAR yes 45982086 1574 70858323
chr19 45980502 45980512 REL JASPAR yes 45982086 1574 70858324
chr19 45980509 45980523 PLAG1 JASPAR yes 45982086 1563 70858325
chr19 45980515 45980527 INSM1 JASPAR yes 45982086 1559 70858326
chr19 45980536 45980551 PRDM1 JASPAR yes 45982086 1535 70858327
chr19 45980546 45980559 SMAD2 JASPAR yes 45982086 1527 70858328
chr19 45980557 45980578 ZNF263 JASPAR yes 45982086 1508 70858329
chr19 45980569 45980582 ELF1 JASPAR yes 45982086 1504 70858330
chr19 45980569 45980590 ZNF263 JASPAR yes 45982086 1496 70858331
chr19 45980570 45980590 RREB1 JASPAR yes 45982086 1496 70858332
chr19 45980572 45980578 PEA3 TRANSFAC yes 45982086 1508 70858333
chr19 45980572 45980582 ETV6 JASPAR yes 45982086 1504 70858334
chr19 45980572 45980583 ELK4 JASPAR yes 45982086 1503 70858335
chr19 45980572 45980583 FLI1 JASPAR yes 45982086 1503 70858336
chr19 45980573 45980581 EHF JASPAR yes 45982086 1505 70858337
chr19 45980574 45980581 SPI1 JASPAR yes 45982086 1505 70858338
chr19 45980583 45980588 SP1 TRANSFAC yes 45982086 1498 70858339
chr19 45980585 45980590 TFAP2A TRANSFAC yes 45982086 1496 70858340
chr19 45980585 45980591 MZF1 JASPAR yes 45982086 1495 70858341
chr19 45980599 45980604 SP1 TRANSFAC yes 45982086 1482 70858342
chr19 45980600 45980610 SREBF1 JASPAR yes 45982086 1476 70858343
chr19 45980600 45980610 SREBF2 JASPAR yes 45982086 1476 70858344
chr19 45980603 45980620 RXRA JASPAR yes 45982086 1466 70858345
chr19 45980609 45980624 HSF1 JASPAR yes 45982086 1462 70858346
chr19 45980638 45980659 ZNF263 JASPAR yes 45982086 1427 70858347
chr19 45980645 45980655 SP1 JASPAR yes 45982086 1431 70858348
chr19 45980646 45980653 CEBPA TRANSFAC yes 45982086 1433 70858349
chr19 45980648 45980658 MZF1 JASPAR yes 45982086 1428 70858350
chr19 45980652 45980657 ETS2 TRANSFAC yes 45982086 1429 70858351
chr19 45980685 45980690 MYC TRANSFAC yes 45982086 1396 70858352
chr19 45980689 45980699 SP1 JASPAR yes 45982086 1387 70858353
chr19 45980712 45980717 ETS2 TRANSFAC yes 45982086 1369 70858354
chr19 45980715 45980720 ETS2 TRANSFAC yes 45982086 1366 70858355
chr19 45980727 45980731 LFA1 TRANSFAC yes 45982086 1355 70858356
SNPs associated with ERCC1[ENSG00000012061.11], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
Details of ERCC1[ENSG00000012061.11]
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Genomic Location chr19:45910591-45982086[-]
TSS 45982086
Gene Name ERCC1
Ensembl ID ENSG00000012061.11
ENTREZID 2067
Uniprot
A0A024R0Q6
P07992
Protein Name
complementation group 1
DNA excision repair protein ERCC-1
ERCC1 protein
Excision repair cross-complementing rodent repair deficiency
Excision repair protein
Expression levels of ERCC1[ENSG00000012061.11]
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