EnhancerDB
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Enhancers that regulate TUBG2[ENSG00000037042.8]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 40748943 40749226 vista24826 40811323 62097
VISTA
chr17 40749080 40753250 enh102567 40811323 58073
Bone (Osteoblast)
chr17 40767925 40773235 enh48036 40811323 38088
Bone Marrow (K562) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Blood (OCI-LY7) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Thymus Heart
chr17 40774039 40787155 enh17165 40811323 24168
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Stomach Placenta Lung (PC-9) Pancreas Epithelial (MCF-7)
chr17 40805539 40806065 vista24827 40811323 5258
VISTA
chr17 40816292 40816343 vista24828 40811323 4969
VISTA
Transcript facotrs that regulate TUBG2[ENSG00000037042.8]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr17 40805751 40806407 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 40811323 4916 108261013
chr17 40805765 40806909 ZNF274 GTRD no Bone Marrow (K562) 40811323 4414 108261014
chr17 40805878 40806816 ZNF274 GTRD no Cervix (HeLa-S3) 40811323 4507 108261020
chr17 40805893 40806994 ZBTB33 GTRD no Lung (A549) 40811323 4329 108261022
chr17 40805989 40806749 ZNF274 GTRD no Bone Marrow (K562) 40811323 4574 108261023
chr17 40805999 40806555 ZBTB33 GTRD no Brain (SK-N-SH) 40811323 4768 108261024
chr17 40806008 40806657 ZNF274 GTRD no Liver (HepG2) 40811323 4666 108261025
chr17 40816054 40816932 ZNF274 GTRD no Bone Marrow (K562) 40811323 4731 108261026
chr17 40816263 40822949 ZNF274 GTRD no Bone Marrow (K562) 40811323 4940 108261027
chr17 40816292 40816307 FOXP1 JASPAR yes 40811323 4969 21240816
chr17 40816293 40816299 TBP TRANSFAC yes 40811323 4970 21240817
chr17 40816293 40816308 FOXP1 JASPAR yes 40811323 4970 21240818
chr17 40816294 40816309 FOXP1 JASPAR yes 40811323 4971 21240819
chr17 40816294 40816315 IRF1 JASPAR yes 40811323 4971 21240820
chr17 40816295 40816310 FOXP1 JASPAR yes 40811323 4972 21240821
chr17 40816295 40816316 IRF1 JASPAR yes 40811323 4972 21240822
chr17 40816296 40816311 FOXP1 JASPAR yes 40811323 4973 21240823
chr17 40816297 40816312 FOXP1 JASPAR yes 40811323 4974 21240824
chr17 40816301 40816988 ZNF274 GTRD no Bone Marrow (K562) 40811323 4978 108261028
chr17 40816313 40817706 ZNF274 GTRD no Bone Marrow (K562) 40811323 4990 108261029
chr17 40816315 40816330 HNF4A JASPAR yes 40811323 4992 21240825
chr17 40816316 40816331 HNF4G JASPAR yes 40811323 4993 21240826
chr17 40816323 40816336 SMAD2 JASPAR yes 40811323 5000 21240827
SNPs associated with TUBG2[ENSG00000037042.8], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 40819809 rs2279844 G A,T 785 Esophagus 4.72073e-05 4879980
chr17 40818584 rs2292749 C T 0 Esophagus 3.77729e-15 4879968
chr17 39823717 rs77282820 G A 987606 Pancreas 0.255354 4874354
chr17 39934077 rs11650969 T G 877246 Spleen 0.327103 4875158
chr17 41803431 rs75107570 T C 984407 Uterus 0.263392 4885960
chr17 40730728 rs62078362 C T 80595 Thyroid 1.96436e-20 4879548
chr17 40225399 rs11079032 T C 585924 Liver 0.340781 4876407
chr17 40512022 rs17881664 G A 299301 Stomach 0.0847025 4878009
chr17 40812797 rs3835175 C CT 0 Adrenal 0.00021413 4879921
Details of TUBG2[ENSG00000037042.8]
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Genomic Location chr17:40811323-40819024[+]
TSS 40811323
Gene Name TUBG2
Ensembl ID ENSG00000037042.8
ENTREZID 27175
Uniprot
Q9NRH3
A0A1B4Z394
Protein Name
Tubulin gamma chain
Tubulin gamma-2 chain
Expression levels of TUBG2[ENSG00000037042.8]
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