EnhancerDB
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Enhancers that regulate HOXC8[ENSG00000037965.4]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr12 54372759 54373189 vista13549 54402832 29643
VISTA
chr12 54384983 54385161 vista13550 54402832 17671
VISTA
chr12 54386194 54392720 enh89659 54402832 10112
Bone (Osteoblast) Prostate (RWPE1)
chr12 54391907 54392298 vista13551 54402832 10534
VISTA
chr12 54400493 54400742 vista13552 54402832 2090
VISTA
chr12 54400746 54401119 vista13553 54402832 1713
VISTA
chr12 54405914 54417704 enh86112 54402832 3082
Colon (HCT116) Bone (Osteoblast) Prostate (RWPE1)
chr12 54411861 54412590 vista13554 54402832 9029
VISTA
chr12 54412238 54415445 vista336 54402832 9406
VISTA
chr12 54413422 54413659 vista13555 54402832 10590
VISTA
chr12 54413878 54414161 vista13556 54402832 11046
VISTA
chr12 54415475 54415883 vista13557 54402832 12643
VISTA
chr12 54416528 54417002 vista13558 54402832 13696
VISTA
chr12 54424968 54425277 vista13559 54402832 22136
VISTA
chr12 54426638 54427789 vista337 54402832 23806
VISTA
chr12 54428725 54440370 enh14745 54402832 25893
Prostate (RWPE1) Blood (OCI-LY7) Placenta Muscle (Myoblast) Muscle (Myotube) Stomach
chr12 54433983 54434162 vista13560 54402832 31151
VISTA
chr12 54444172 54444407 vista13561 54402832 41340
VISTA
chr12 54446030 54446105 vista13562 54402832 43198
VISTA
chr12 54464175 54472036 enh43745 54402832 61343
Muscle (Myotube) Neural Stem Cells (H9) Bone (Osteoblast)
chr12 54472705 54478630 enh51214 54402832 69873
Uterus Blood (T-cell) Large Intestine
chr12 54479885 54484035 enh109555 54402832 77053
Stomach
Transcript facotrs that regulate HOXC8[ENSG00000037965.4]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr12 54399936 54402649 ZNF274 GTRD no Bone Marrow (K562) 54402832 183 108036743
chr12 54399936 54402649 ZNF274 GTRD no Bone Marrow (K562) 54402832 183 108036744
chr12 54400286 54400796 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 54402832 2036 108036745
chr12 54400286 54400796 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 54402832 2036 108036746
chr12 54400493 54400503 TEAD1 JASPAR yes 54402832 2329 82411123
chr12 54400493 54400503 TEAD4 JASPAR yes 54402832 2329 82411124
chr12 54400494 54400502 TEAD3 JASPAR yes 54402832 2330 82411125
chr12 54400506 54400512 SOX10 JASPAR yes 54402832 2320 82411126
chr12 54400511 54400521 ELK1 JASPAR yes 54402832 2311 82411127
chr12 54400511 54400523 ELF1 JASPAR yes 54402832 2309 82411128
chr12 54400515 54400521 ETS1 JASPAR yes 54402832 2311 82411129
chr12 54400515 54400521 SPI1 JASPAR yes 54402832 2311 82411130
chr12 54400547 54400558 CDX2 JASPAR yes 54402832 2274 82411131
chr12 54400548 54400559 HOXA10 JASPAR yes 54402832 2273 82411132
chr12 54400549 54400558 CDX1 JASPAR yes 54402832 2274 82411133
chr12 54400549 54400559 HOXA13 JASPAR yes 54402832 2273 82411134
chr12 54400549 54400559 HOXB13 JASPAR yes 54402832 2273 82411135
chr12 54400565 54400586 ZNF263 JASPAR yes 54402832 2246 82411136
chr12 54400566 54400571 GATA2 JASPAR yes 54402832 2261 82411137
chr12 54400567 54400577 ZNF740 JASPAR yes 54402832 2255 82411138
chr12 54400569 54400589 RREB1 JASPAR yes 54402832 2243 82411139
chr12 54400570 54400590 RREB1 JASPAR yes 54402832 2242 82411140
chr12 54400571 54400591 RREB1 JASPAR yes 54402832 2241 82411141
chr12 54400575 54400585 SP1 JASPAR yes 54402832 2247 82411142
chr12 54400576 54400586 SP1 JASPAR yes 54402832 2246 82411143
chr12 54400584 54400594 BARHL2 JASPAR yes 54402832 2238 82411144
chr12 54400590 54400596 GATA1 TRANSFAC yes 54402832 2236 82411145
chr12 54400590 54400598 GATA5 JASPAR yes 54402832 2234 82411146
chr12 54400597 54400608 NRF1 JASPAR yes 54402832 2224 82411147
chr12 54400619 54400632 TFAP2A JASPAR yes 54402832 2200 82411148
chr12 54400619 54400632 TFAP2B JASPAR yes 54402832 2200 82411149
chr12 54400619 54400632 TFAP2C JASPAR yes 54402832 2200 82411150
chr12 54400620 54400634 PLAG1 JASPAR yes 54402832 2198 82411151
chr12 54400636 54400643 NFATC2 JASPAR yes 54402832 2189 82411152
chr12 54400643 54400664 IRF1 JASPAR yes 54402832 2168 82411153
chr12 54400647 54400652 ETS2 TRANSFAC yes 54402832 2180 82411154
chr12 54400647 54400661 SPIC JASPAR yes 54402832 2171 82411155
chr12 54400647 54400661 STAT1 JASPAR yes 54402832 2171 82411156
chr12 54400647 54400662 PRDM1 JASPAR yes 54402832 2170 82411157
chr12 54400647 54400662 STAT2 JASPAR yes 54402832 2170 82411158
chr12 54400647 54400665 IRF2 JASPAR yes 54402832 2167 82411159
chr12 54400659 54400663 YY1 TRANSFAC yes 54402832 2169 82411160
chr12 54400659 54400669 HOXC10 JASPAR yes 54402832 2163 82411161
chr12 54400659 54400669 HOXD11 JASPAR yes 54402832 2163 82411162
chr12 54400659 54400670 HOXA10 JASPAR yes 54402832 2162 82411163
chr12 54400659 54400670 HOXC11 JASPAR yes 54402832 2162 82411164
chr12 54400660 54400669 CDX1 JASPAR yes 54402832 2163 82411165
chr12 54400660 54400671 CDX2 JASPAR yes 54402832 2161 82411166
chr12 54400666 54400682 SOX8 JASPAR yes 54402832 2150 82411167
chr12 54400678 54400688 RORA JASPAR yes 54402832 2144 82411168
chr12 54400679 54400692 ZBTB18 JASPAR yes 54402832 2140 82411169
chr12 54400692 54400707 HNF4G JASPAR yes 54402832 2125 82411170
chr12 54400693 54400707 NR2F1 JASPAR yes 54402832 2125 82411171
chr12 54400693 54400708 HNF4A JASPAR yes 54402832 2124 82411172
chr12 54400700 54400717 NR3C1 JASPAR yes 54402832 2115 82411173
chr12 54400700 54401165 TCF7L2 GTRD no Colon (HCT116) 54402832 1667 108036747
chr12 54400700 54401165 TCF7L2 GTRD no Colon (HCT116) 54402832 1667 108036748
chr12 54400779 54400789 GCM2 JASPAR yes 54402832 2043 82411174
chr12 54400779 54400790 GCM1 JASPAR yes 54402832 2042 82411175
chr12 54400792 54400797 SP1 TRANSFAC yes 54402832 2035 82411176
chr12 54400797 54400801 NFE TRANSFAC yes 54402832 2031 82411177
chr12 54400800 54400819 CTCF JASPAR yes 54402832 2013 82411178
chr12 54400803 54400817 ZIC1 JASPAR yes 54402832 2015 82411179
chr12 54400803 54400818 ZIC4 JASPAR yes 54402832 2014 82411180
chr12 54400819 54400833 EBF1 JASPAR yes 54402832 1999 82411181
chr12 54400830 54400845 TFAP2C JASPAR yes 54402832 1987 82411182
chr12 54400846 54400865 CTCF JASPAR yes 54402832 1967 82411183
chr12 54400851 54400872 ZNF263 JASPAR yes 54402832 1960 82411184
chr12 54400855 54400868 NR2F1 JASPAR yes 54402832 1964 82411185
chr12 54400861 54400882 ZNF263 JASPAR yes 54402832 1950 82411186
chr12 54400863 54400874 E2F6 JASPAR yes 54402832 1958 82411187
chr12 54400876 54401284 ZNF274 GTRD no Bone Marrow (K562) 54402832 1548 108036749
chr12 54400879 54400894 SOX21 JASPAR yes 54402832 1938 82411188
chr12 54400880 54400884 H1TF2 TRANSFAC yes 54402832 1948 82411189
chr12 54400880 54400884 NFE TRANSFAC yes 54402832 1948 82411190
chr12 54400880 54400884 SRF TRANSFAC yes 54402832 1948 82411191
chr12 54400882 54400897 HNF4A JASPAR yes 54402832 1935 82411192
chr12 54400912 54400916 LFA1 TRANSFAC yes 54402832 1916 82411193
chr12 54400925 54400935 GCM2 JASPAR yes 54402832 1897 82411194
chr12 54400926 54400936 ZNF740 JASPAR yes 54402832 1896 82411195
chr12 54400931 54400936 SP1 TRANSFAC yes 54402832 1896 82411196
chr12 54400932 54400945 NFKB1 JASPAR yes 54402832 1887 82411197
chr12 54400932 54400945 NFKB2 JASPAR yes 54402832 1887 82411198
chr12 54400933 54400943 RELA JASPAR yes 54402832 1889 82411199
chr12 54400933 54400944 NFKB1 JASPAR yes 54402832 1888 82411200
chr12 54400934 54400944 NFKB1 JASPAR yes 54402832 1888 82411201
chr12 54400934 54400944 RELA JASPAR yes 54402832 1888 82411202
chr12 54400934 54400951 BCL6B JASPAR yes 54402832 1881 82411203
chr12 54400939 54400945 MZF1 JASPAR yes 54402832 1887 82411204
chr12 54400991 54401005 EBF1 JASPAR yes 54402832 1827 82411205
chr12 54401005 54401012 MEIS1 JASPAR yes 54402832 1820 82411206
chr12 54401005 54401013 MEIS2 JASPAR yes 54402832 1819 82411207
chr12 54401020 54401024 YY1 TRANSFAC yes 54402832 1808 82411208
chr12 54401024 54401030 MZF1 JASPAR yes 54402832 1802 82411209
chr12 54401030 54401038 DLX6 JASPAR yes 54402832 1794 82411210
chr12 54401030 54401038 MSX1 JASPAR yes 54402832 1794 82411211
chr12 54401034 54401041 NKX3-1 JASPAR yes 54402832 1791 82411212
chr12 54401049 54401059 SP1 JASPAR yes 54402832 1773 82411213
chr12 54401050 54401070 RREB1 JASPAR yes 54402832 1762 82411214
chr12 54401061 54401072 E2F6 JASPAR yes 54402832 1760 82411215
chr12 54401062 54401067 SP1 TRANSFAC yes 54402832 1765 82411216
chr12 54401063 54401073 SP1 JASPAR yes 54402832 1759 82411217
chr12 54401083 54401528 ZNF274 GTRD no Bone Marrow (K562) 54402832 1304 108036750
chr12 54401096 54401105 THAP1 JASPAR yes 54402832 1727 82411218
chr12 54401104 54401115 YY2 JASPAR yes 54402832 1717 82411219
chr12 54401112 54401117 ETS2 TRANSFAC yes 54402832 1715 82411220
SNPs associated with HOXC8[ENSG00000037965.4], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr12 54417259 rs746423 C T 9689 Esophagus 2.49388e-05 2649978
chr12 54417259 rs746423 C T 9689 Esophagus 5.37487e-05 2649978
chr12 54558066 rs75607648 T C 150496 Breast 0.36887 2650918
chr12 54265254 rs7963390 A G 137578 Thyroid 0.0886095 2648900
chr12 54417259 rs746423 C T 9689 Lung 0.000157529 2649978
Details of HOXC8[ENSG00000037965.4]
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Genomic Location chr12:54402832-54407570[+]
TSS 54402832
Gene Name HOXC8
Ensembl ID ENSG00000037965.4
ENTREZID 3224
Uniprot
P31273
Protein Name
Homeobox protein Hox-C8
Expression levels of HOXC8[ENSG00000037965.4]
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