EnhancerDB
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Enhancers that regulate BARX2[ENSG00000043039.5]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr11 129149922 129150564 vista12123 129245835 95271
VISTA
chr11 129151145 129159095 enh14387 129245835 86740
Placenta Uterus Stomach
chr11 129163705 129167855 enh29265 129245835 77980
Astrocyte Epithelial (MCF-7)
chr11 129181086 129196735 enh14388 129245835 49100
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Lung Stomach Muscle (A673) Placenta Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Heart
chr11 129185836 129186114 vista12124 129245835 59721
VISTA
chr11 129199755 129204055 enh87938 129245835 41780
Pancreas Pancreas (Panc1) Epithelial (MCF-7)
chr11 129201080 129201232 vista12125 129245835 44603
VISTA
chr11 129212265 129216735 enh103639 129245835 29100
Peripheral Blood (MM.1S)
chr11 129220625 129224775 enh103640 129245835 21060
Peripheral Blood (MM.1S)
chr11 129230505 129238855 enh74938 129245835 6980
Prostate (PC-3) Muscle (A673) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas
chr11 129239352 129239433 vista12126 129245835 6402
VISTA
chr11 129242787 129242887 vista12127 129245835 2948
VISTA
chr11 129244480 129244782 vista12128 129245835 1053
VISTA
chr11 129246487 129246784 vista12129 129245835 652
VISTA
chr11 129250080 129250185 vista12130 129245835 4245
VISTA
chr11 129251937 129252027 vista12131 129245835 6102
VISTA
chr11 129254965 129259235 enh51061 129245835 9130
Muscle (A673) Large Intestine
chr11 129258072 129258268 vista12132 129245835 12237
VISTA
chr11 129259365 129266855 enh14389 129245835 13530
Muscle (A673) Placenta Peripheral Blood (MM.1S) Liver (HepG2)
chr11 129260546 129260711 vista12133 129245835 14711
VISTA
chr11 129267460 129267723 vista12134 129245835 21625
VISTA
chr11 129280505 129291535 enh51062 129245835 34670
Large Intestine Muscle (A673) Peripheral Blood (MM.1S) Pancreas Stomach
chr11 129282439 129282677 vista12135 129245835 36604
VISTA
chr11 129287954 129288140 vista12136 129245835 42119
VISTA
chr11 129294765 129300275 enh51063 129245835 48930
Muscle (A673) Large Intestine Stomach
chr11 129315060 129315380 vista12137 129245835 69225
VISTA
chr11 129315861 129316038 vista12138 129245835 70026
VISTA
chr11 129317318 129317884 vista12139 129245835 71483
VISTA
chr11 129323125 129331279 enh14390 129245835 77290
Esophagus Prostate (PC-3) Placenta Epithelial (MCF-7)
Transcript facotrs that regulate BARX2[ENSG00000043039.5]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr11 129242148 129243680 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 129245835 2155 108007521
chr11 129242148 129243805 EZH2 UCSC Txn Factor no Conserved 129245835 2030 108007522
chr11 129242418 129243208 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 129245835 2627 108007523
chr11 129242545 129243161 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 129245835 2674 108007524
chr11 129242629 129243419 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 129245835 2416 108007525
chr11 129242790 129242804 PAX6 JASPAR yes 129245835 3031 114157148
chr11 129242795 129242806 E2F4 JASPAR yes 129245835 3029 114157149
chr11 129242795 129242806 E2F6 JASPAR yes 129245835 3029 114157150
chr11 129242797 129242805 E2F1 JASPAR yes 129245835 3030 114157151
chr11 129242798 129242806 FEV JASPAR yes 129245835 3029 114157152
chr11 129242820 129242834 PLAG1 JASPAR yes 129245835 3001 114157153
chr11 129242822 129242835 TFAP2B JASPAR yes 129245835 3000 114157154
chr11 129242829 129242835 SP1 TRANSFAC yes 129245835 3000 114157155
chr11 129242830 129242835 SP1 TRANSFAC yes 129245835 3000 114157156
chr11 129242830 129242841 E2F4 JASPAR yes 129245835 2994 114157157
chr11 129242831 129242836 SP1 TRANSFAC yes 129245835 2999 114157158
chr11 129242831 129242837 SP1 TRANSFAC yes 129245835 2998 114157159
chr11 129242833 129242854 ZNF263 JASPAR yes 129245835 2981 114157160
chr11 129242836 129242857 ZNF263 JASPAR yes 129245835 2978 114157161
chr11 129242840 129243155 ZNF274 GTRD no Blood (GM12878) 129245835 2680 108007526
chr11 129242846 129242867 ZNF263 JASPAR yes 129245835 2968 114157162
chr11 129242847 129242852 ETS2 TRANSFAC yes 129245835 2983 114157163
chr11 129242849 129242870 ZNF263 JASPAR yes 129245835 2965 114157164
chr11 129242850 129242871 ZNF263 JASPAR yes 129245835 2964 114157165
chr11 129242852 129242873 ZNF263 JASPAR yes 129245835 2962 114157166
chr11 129242853 129242874 ZNF263 JASPAR yes 129245835 2961 114157167
chr11 129242855 129242876 ZNF263 JASPAR yes 129245835 2959 114157168
chr11 129242861 129242867 MAZ TRANSFAC yes 129245835 2968 114157169
chr11 129242861 129242872 E2F6 JASPAR yes 129245835 2963 114157170
chr11 129242863 129242884 ZNF263 JASPAR yes 129245835 2951 114157171
chr11 129242865 129242870 ETS2 TRANSFAC yes 129245835 2965 114157172
chr11 129242875 129243185 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 129245835 2650 108007527
chr11 129243813 129244692 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 129245835 1143 108007528
chr11 129244488 129244503 STAT1 JASPAR yes 129245835 1332 114157173
chr11 129244491 129244501 ELK1 JASPAR yes 129245835 1334 114157174
chr11 129244493 129244503 GABPA JASPAR yes 129245835 1332 114157175
chr11 129244495 129244501 ETS1 JASPAR yes 129245835 1334 114157176
chr11 129244495 129244501 SPI1 JASPAR yes 129245835 1334 114157177
chr11 129244518 129244528 GCM2 JASPAR yes 129245835 1307 114157178
chr11 129244522 129244542 ESR1 JASPAR yes 129245835 1293 114157179
chr11 129244524 129244544 PPARG JASPAR yes 129245835 1291 114157180
chr11 129244525 129244543 ESR2 JASPAR yes 129245835 1292 114157181
chr11 129244526 129244544 ESR2 JASPAR yes 129245835 1291 114157182
chr11 129244527 129244542 ESR2 JASPAR yes 129245835 1293 114157183
chr11 129244527 129244547 ESR1 JASPAR yes 129245835 1288 114157184
chr11 129244535 129244541 NFE2 TRANSFAC yes 129245835 1294 114157185
chr11 129244543 129244552 HIC2 JASPAR yes 129245835 1283 114157186
chr11 129244544 129244556 TFAP2A JASPAR yes 129245835 1279 114157187
chr11 129244544 129244556 TFAP2C JASPAR yes 129245835 1279 114157188
chr11 129244597 129244609 FOXC2 JASPAR yes 129245835 1226 114157189
chr11 129244598 129244609 FOXC1 JASPAR yes 129245835 1226 114157190
chr11 129244601 129244616 FOXP1 JASPAR yes 129245835 1219 114157191
chr11 129244603 129244614 FOXC1 JASPAR yes 129245835 1221 114157192
chr11 129244603 129244615 FOXC2 JASPAR yes 129245835 1220 114157193
chr11 129244604 129244615 FOXP2 JASPAR yes 129245835 1220 114157194
chr11 129244605 129244609 TEAD2 TRANSFAC yes 129245835 1226 114157195
chr11 129244605 129244610 TBP TRANSFAC yes 129245835 1225 114157196
chr11 129244606 129244614 FOXG1 JASPAR yes 129245835 1221 114157197
chr11 129244606 129244614 FOXO3 JASPAR yes 129245835 1221 114157198
chr11 129244606 129244615 SRY JASPAR yes 129245835 1220 114157199
chr11 129244619 129244625 TBP TRANSFAC yes 129245835 1210 114157200
chr11 129244625 129244634 RUNX2 JASPAR yes 129245835 1201 114157201
chr11 129244625 129244635 RUNX3 JASPAR yes 129245835 1200 114157202
chr11 129244726 129245516 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 129245835 319 108007529
chr11 129244729 129244734 H4TF1 TRANSFAC yes 129245835 1101 114157203
chr11 129244730 129244738 FEV JASPAR yes 129245835 1097 114157204
chr11 129244752 129244756 H1TF2 TRANSFAC yes 129245835 1079 114157205
chr11 129244752 129244756 NFE TRANSFAC yes 129245835 1079 114157206
chr11 129244752 129244756 SRF TRANSFAC yes 129245835 1079 114157207
chr11 129244752 129244758 NFYC TRANSFAC yes 129245835 1077 114157208
chr11 129244773 129244780 SPIB JASPAR yes 129245835 1055 114157209
chr11 129245974 129246570 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 129245835 139 108007530
chr11 129245992 129246782 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 129245835 157 108007531
chr11 129246326 129246636 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 129245835 491 108007532
chr11 129246371 129249954 ZBTB33 GTRD no Brain (SK-N-SH) 129245835 536 108007533
chr11 129246498 129246509 TBX20 JASPAR yes 129245835 663 114157210
chr11 129246499 129246509 TBX21 JASPAR yes 129245835 664 114157211
chr11 129246513 129246516 MYB TRANSFAC yes 129245835 678 114157212
chr11 129246532 129246536 NFE TRANSFAC yes 129245835 697 114157213
chr11 129246546 129246557 CEBPA JASPAR yes 129245835 711 114157214
chr11 129246565 129246570 GATA2 JASPAR yes 129245835 730 114157215
chr11 129246603 129246609 TCF4 TRANSFAC yes 129245835 768 114157216
chr11 129246605 129247920 ZBTB33 GTRD no Brain (SK-N-SH) 129245835 770 108007534
chr11 129246630 129247793 ZBTB33 GTRD no Brain (SK-N-SH) 129245835 795 108007535
chr11 129246634 129246652 RARA JASPAR yes 129245835 799 114157217
chr11 129246653 129246659 SOX10 JASPAR yes 129245835 818 114157218
chr11 129246658 129246670 HES7 JASPAR yes 129245835 823 114157219
chr11 129246669 129246679 RORA JASPAR yes 129245835 834 114157220
chr11 129246670 129246681 ESRRA JASPAR yes 129245835 835 114157221
chr11 129246670 129246683 NR2F1 JASPAR yes 129245835 835 114157222
chr11 129246672 129246680 NR4A2 JASPAR yes 129245835 837 114157223
chr11 129246673 129246688 ESR2 JASPAR yes 129245835 838 114157224
chr11 129246674 129246678 ESR1 TRANSFAC yes 129245835 839 114157225
chr11 129246693 129246707 PAX6 JASPAR yes 129245835 858 114157226
chr11 129246703 129246713 RORA JASPAR yes 129245835 868 114157227
chr11 129246704 129246715 ESRRA JASPAR yes 129245835 869 114157228
chr11 129246704 129246717 NR2F1 JASPAR yes 129245835 869 114157229
chr11 129246706 129246714 NR4A2 JASPAR yes 129245835 871 114157230
chr11 129246707 129246722 ESR2 JASPAR yes 129245835 872 114157231
chr11 129246708 129246712 ESR1 TRANSFAC yes 129245835 873 114157232
chr11 129246725 129246743 ESR1 JASPAR yes 129245835 890 114157233
chr11 129246743 129247777 ZBTB33 GTRD no Brain (SK-N-SH) 129245835 908 108007536
chr11 129246747 129246756 SRY JASPAR yes 129245835 912 114157234
chr11 129246749 129246752 MYB TRANSFAC yes 129245835 914 114157235
chr11 129246750 129246766 SOX4 JASPAR yes 129245835 915 114157236
chr11 129246752 129246763 FOXA1 JASPAR yes 129245835 917 114157237
chr11 129246753 129246764 FOXB1 JASPAR yes 129245835 918 114157238
chr11 129246753 129246764 FOXC1 JASPAR yes 129245835 918 114157239
chr11 129246753 129246765 FOXC2 JASPAR yes 129245835 918 114157240
chr11 129246755 129246763 FOXO3 JASPAR yes 129245835 920 114157241
chr11 129246760 129247756 ZBTB33 GTRD no Brain (SK-N-SH) 129245835 925 108007537
chr11 129246761 129246765 YY1 TRANSFAC yes 129245835 926 114157242
chr11 129246761 129246772 FOSL1 JASPAR yes 129245835 926 114157243
chr11 129246761 129246772 JUND JASPAR yes 129245835 926 114157244
chr11 129246762 129246773 JUNB JASPAR yes 129245835 927 114157245
chr11 129246762 129246776 JUN JASPAR yes 129245835 927 114157246
chr11 129246763 129246776 EOMES JASPAR yes 129245835 928 114157247
chr11 129246765 129246775 TBR1 JASPAR yes 129245835 930 114157248
chr11 129246765 129246776 TBX2 JASPAR yes 129245835 930 114157249
chr11 129246766 129246776 TBX21 JASPAR yes 129245835 931 114157250
chr11 129246767 129246775 MGA JASPAR yes 129245835 932 114157251
chr11 129246767 129246775 TBX15 JASPAR yes 129245835 932 114157252
chr11 129246767 129246775 TBX1 JASPAR yes 129245835 932 114157253
chr11 129246767 129246775 TBX4 JASPAR yes 129245835 932 114157254
chr11 129246767 129246775 TBX5 JASPAR yes 129245835 932 114157255
chr11 129246767 129246776 ZEB1 JASPAR yes 129245835 932 114157256
chr11 129246768 129246778 FIGLA JASPAR yes 129245835 933 114157257
chr11 129246768 129246778 ID4 JASPAR yes 129245835 933 114157258
chr11 129246768 129246778 TCF3 JASPAR yes 129245835 933 114157259
chr11 129246768 129246778 TCF4 JASPAR yes 129245835 933 114157260
chr11 129246770 129246775 USF2 TRANSFAC yes 129245835 935 114157261
chr11 129246773 129247684 ZBTB33 GTRD no Brain (SK-N-SH) 129245835 938 108007538
chr11 129248650 129250180 TEF1 GTRD no Bone (Osteoblast) 129245835 2815 108007539
chr11 129249174 129250232 TCF7L2 GTRD no Colon (HCT116) 129245835 3339 108007540
chr11 129249402 129250301 TCF7L2 GTRD no Colon (HCT116) 129245835 3567 108007541
chr11 129249818 129250322 MYOD GTRD no Muscle (Myoblast) 129245835 3983 108007542
chr11 129250080 129250083 MYB TRANSFAC yes 129245835 4245 114157262
chr11 129250092 129250100 MGA JASPAR yes 129245835 4257 114157263
chr11 129250092 129250100 TBX15 JASPAR yes 129245835 4257 114157264
chr11 129250092 129250100 TBX1 JASPAR yes 129245835 4257 114157265
chr11 129250092 129250100 TBX4 JASPAR yes 129245835 4257 114157266
chr11 129250092 129250100 TBX5 JASPAR yes 129245835 4257 114157267
chr11 129250092 129250108 T JASPAR yes 129245835 4257 114157268
chr11 129250094 129250108 EBF1 JASPAR yes 129245835 4259 114157269
chr11 129250096 129250107 EBF1 JASPAR yes 129245835 4261 114157270
chr11 129250118 129250136 RARA JASPAR yes 129245835 4283 114157271
chr11 129250131 129250135 YY1 TRANSFAC yes 129245835 4296 114157272
chr11 129250135 129250140 TFAP2A TRANSFAC yes 129245835 4300 114157273
chr11 129250135 129250141 MZF1 JASPAR yes 129245835 4300 114157274
chr11 129250137 129250142 ETS2 TRANSFAC yes 129245835 4302 114157275
chr11 129250142 129250154 FOXI1 JASPAR yes 129245835 4307 114157276
chr11 129250142 129250156 GATA2 JASPAR yes 129245835 4307 114157277
chr11 129250142 129250157 FOXP1 JASPAR yes 129245835 4307 114157278
chr11 129250143 129250154 FOXP2 JASPAR yes 129245835 4308 114157279
chr11 129250143 129250157 FOXF2 JASPAR yes 129245835 4308 114157280
chr11 129250144 129250152 FOXG1 JASPAR yes 129245835 4309 114157281
chr11 129250146 129250154 GATA3 JASPAR yes 129245835 4311 114157282
chr11 129250175 129250179 YY1 TRANSFAC yes 129245835 4340 114157283
SNPs associated with BARX2[ENSG00000043039.5], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr11 129698076 rs150737553 T C 375905 Esophagus 0.360556 2366516
chr11 129873028 rs12805829 C T 550857 Breast 0.468673 2367595
chr11 128446318 rs12790965 C A,T 799517 Thyroid 0.158025 2358093
chr11 129255227 rs188127185 G A 0 Stomach 0.414659 2363371
Details of BARX2[ENSG00000043039.5]
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Genomic Location chr11:129245835-129322171[+]
TSS 129245835
Gene Name BARX2
Ensembl ID ENSG00000043039.5
ENTREZID 8538
Uniprot
Q9UMQ3
Protein Name
Homeobox protein BarH-like 2
Expression levels of BARX2[ENSG00000043039.5]
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