EnhancerDB
  1. Home
  2. Gene
  3. NTN1[ENSG00000065320.4]
Enhancers that regulate NTN1[ENSG00000065320.4]
Back to top
Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 8820211 8831395 enh32075 8924859 93464
Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (GM12878) Colon (HCT116) Peripheral Blood (MM.1S) Blood (T-cell)
chr17 8825548 8827035 vista23930 8924859 97824
VISTA
chr17 8827075 8827289 vista23931 8924859 97570
VISTA
chr17 8827307 8827676 vista23932 8924859 97183
VISTA
chr17 8829646 8830111 vista23933 8924859 94748
VISTA
chr17 8830714 8831256 vista23934 8924859 93603
VISTA
chr17 8836616 8840778 enh87062 8924859 84081
Blood (T-cell) Blood (GM12878)
chr17 8837408 8838325 vista23935 8924859 86534
VISTA
chr17 8838354 8838934 vista23936 8924859 85925
VISTA
chr17 8840853 8847875 enh47999 8924859 76984
Blood (T-cell) Blood (GM12878) Peripheral Blood (MM.1S) Thymus Stomach
chr17 8843294 8843654 vista23937 8924859 81205
VISTA
chr17 8847904 8848514 vista23938 8924859 76345
VISTA
chr17 8849870 8850019 vista23939 8924859 74840
VISTA
chr17 8850448 8850862 vista23940 8924859 73997
VISTA
chr17 8850657 8866289 enh16976 8924859 58570
Blood (T-cell) Blood (GM12878) Placenta Pancreas Thymus Stomach
chr17 8854590 8854853 vista23941 8924859 70006
VISTA
chr17 8855312 8855901 vista23942 8924859 68958
VISTA
chr17 8856369 8857083 vista23943 8924859 67776
VISTA
chr17 8857526 8857964 vista23944 8924859 66895
VISTA
chr17 8862739 8862885 vista23945 8924859 61974
VISTA
chr17 8865882 8866269 vista23946 8924859 58590
VISTA
chr17 8866746 8867281 vista23947 8924859 57578
VISTA
chr17 8869986 8870720 vista23948 8924859 54139
VISTA
chr17 8878761 8878989 vista23949 8924859 45870
VISTA
chr17 8881143 8885253 enh87063 8924859 39606
Blood (GM12878)
chr17 8886517 8891089 enh87064 8924859 33770
Blood (T-cell) Blood (GM12878)
chr17 8888376 8888874 vista23950 8924859 35985
VISTA
chr17 8895612 8903701 enh16977 8924859 21158
Muscle (Myotube) Placenta
chr17 8929725 8933875 enh109745 8924859 4866
Stomach
chr17 8937785 8941935 enh16978 8924859 12926
Placenta
chr17 8946425 8950575 enh109746 8924859 21566
Stomach
chr17 8952125 8958995 enh16979 8924859 27266
Epithelial (MCF-7) Esophagus Astrocyte Placenta Stomach
chr17 8958048 8958250 vista23951 8924859 33189
VISTA
chr17 8962305 8968016 enh16980 8924859 37446
Placenta Neural Stem Cells (H9)
chr17 8972462 8979735 enh16981 8924859 47603
Ovary Esophagus Stomach Placenta Lung (PC-9) Pancreas Uterus Heart
chr17 8980825 8985275 enh107695 8924859 55966
Blood (T-cell) Brain (SK-N-MC)
chr17 9002765 9015486 enh65011 8924859 77906
Brain (SK-N-MC) Muscle (A673) Pancreas Neural Stem Cells (H9) Heart
chr17 9016845 9021435 enh48000 8924859 91986
Pancreas Uterus Thymus Stomach
Transcript facotrs that regulate NTN1[ENSG00000065320.4]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr17 8929731 8929740 SRY JASPAR yes 8924859 4872 53013506
chr17 8929736 8929750 TCF7L2 JASPAR yes 8924859 4877 53013507
chr17 8929740 8929746 TCF4 TRANSFAC yes 8924859 4881 53013508
chr17 8929751 8929767 SOX8 JASPAR yes 8924859 4892 53013509
chr17 8929758 8929762 TEAD2 TRANSFAC yes 8924859 4899 53013510
chr17 8929773 8929780 MEIS1 JASPAR yes 8924859 4914 53013511
chr17 8929773 8929781 MEIS2 JASPAR yes 8924859 4914 53013512
chr17 8929773 8929781 MEIS3 JASPAR yes 8924859 4914 53013513
chr17 8929774 8929786 PKNOX1 JASPAR yes 8924859 4915 53013514
chr17 8929774 8929786 PKNOX2 JASPAR yes 8924859 4915 53013515
chr17 8929774 8929786 TGIF1 JASPAR yes 8924859 4915 53013516
chr17 8929774 8929786 TGIF2 JASPAR yes 8924859 4915 53013517
chr17 8929792 8929795 MYB TRANSFAC yes 8924859 4933 53013518
chr17 8929793 8929805 FOXI1 JASPAR yes 8924859 4934 53013519
chr17 8929806 8929812 ETS1 JASPAR yes 8924859 4947 53013520
chr17 8929806 8929812 SPI1 JASPAR yes 8924859 4947 53013521
chr17 8929809 8929814 SP1 TRANSFAC yes 8924859 4950 53013522
chr17 8929816 8929827 DMRT3 JASPAR yes 8924859 4957 53013523
chr17 8929816 8929834 MAFF JASPAR yes 8924859 4957 53013524
chr17 8929817 8929832 MAFK JASPAR yes 8924859 4958 53013525
chr17 8929843 8929856 ZBTB18 JASPAR yes 8924859 4984 53013526
chr17 8929844 8929854 MAX JASPAR yes 8924859 4985 53013527
chr17 8929846 8929859 ZBTB18 JASPAR yes 8924859 4987 53013528
chr17 8929848 8929858 MAX JASPAR yes 8924859 4989 53013529
chr17 8929850 8929871 IRF1 JASPAR yes 8924859 4991 53013530
SNPs associated with NTN1[ENSG00000065320.4], confirmed by eQTL
Back to top
Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 9422443 rs11657426 T C 275126 Esophagus 0.225391 4743945
chr17 8938562 rs8069226 C T 0 Esophagus 0.00286316 4739555
chr17 8920599 rs4791330 T C 4260 Heart 0.00020108 4739421
chr17 9659961 rs409729 T C 512644 Ovary 0.299626 4744902
chr17 9213674 rs141085391 T G 66357 Uterus 0.20415 4741983
chr17 9791570 rs16958907 T C 644253 Thyroid 0.220517 4745759
chr17 9110564 rs56332881 C T 0 Lung 2.37703e-10 4740871
Details of NTN1[ENSG00000065320.4]
Back to top
Genomic Location chr17:8924859-9147317[+]
TSS 8924859
Gene Name NTN1
Ensembl ID ENSG00000065320.4
ENTREZID 9423
Uniprot
O95631
Protein Name
Netrin-1
Expression levels of NTN1[ENSG00000065320.4]
Back to top