EnhancerDB
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Enhancers that regulate CACNA1S[ENSG00000081248.6]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 200981245 200991765 enh12515 201081694 89929
Bone Marrow (K562) Skin (Keratinocyte) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Esophagus Lung (A549) Blood (GM12878) Placenta Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myotube) Thymus Stomach
chr1 200986349 200986762 vista4533 201081694 94932
VISTA
chr1 200990087 200990628 vista4534 201081694 91066
VISTA
chr1 201032066 201032442 vista4535 201081694 49252
VISTA
chr1 201071545 201075695 enh50139 201081694 5999
Large Intestine
chr1 201084133 201084558 vista4536 201081694 2439
VISTA
chr1 201103985 201111635 enh74472 201081694 22291
Muscle (A673) Uterus Stomach
chr1 201122119 201122123 vista4537 201081694 40425
VISTA
chr1 201128685 201132835 enh103187 201081694 46991
Peripheral Blood (MM.1S)
chr1 201134565 201138935 enh90756 201081694 52871
Bone Marrow (K562)
chr1 201139670 201140154 vista4538 201081694 57976
VISTA
chr1 201160901 201161255 vista4539 201081694 79207
VISTA
Transcript facotrs that regulate CACNA1S[ENSG00000081248.6]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 201083457 201084671 EZH2 UCSC Txn Factor no Conserved 201081694 1763 107855880
chr1 201084041 201084371 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 201081694 2347 107855881
chr1 201084197 201084209 CREB1 JASPAR yes 201081694 2503 118431194
chr1 201084205 201084215 NKX2-3 JASPAR yes 201081694 2511 118431195
chr1 201084206 201084215 NKX2-8 JASPAR yes 201081694 2512 118431196
chr1 201084222 201084237 ZBTB33 JASPAR yes 201081694 2528 118431197
chr1 201084223 201084234 E2F1 JASPAR yes 201081694 2529 118431198
chr1 201084227 201084246 REST JASPAR yes 201081694 2533 118431199
chr1 201084276 201084288 TFAP2A JASPAR yes 201081694 2582 118431200
chr1 201084276 201084288 TFAP2B JASPAR yes 201081694 2582 118431201
chr1 201084291 201084296 ETS2 TRANSFAC yes 201081694 2597 118431202
chr1 201084296 201084300 LFA1 TRANSFAC yes 201081694 2602 118431203
chr1 201084304 201084317 NFKB1 JASPAR yes 201081694 2610 118431204
chr1 201084304 201084317 NFKB2 JASPAR yes 201081694 2610 118431205
chr1 201084307 201084317 NFKB1 JASPAR yes 201081694 2613 118431206
chr1 201084307 201084318 NFKB1 JASPAR yes 201081694 2613 118431207
chr1 201084334 201084340 SP1 TRANSFAC yes 201081694 2640 118431208
chr1 201084335 201084340 SP1 TRANSFAC yes 201081694 2641 118431209
chr1 201084361 201084372 FLI1 JASPAR yes 201081694 2667 118431210
chr1 201084362 201084370 EHF JASPAR yes 201081694 2668 118431211
chr1 201084362 201084382 ESR1 JASPAR yes 201081694 2668 118431212
chr1 201084365 201084383 ESR2 JASPAR yes 201081694 2671 118431213
chr1 201084367 201084382 ESR2 JASPAR yes 201081694 2673 118431214
chr1 201084367 201084387 ESR1 JASPAR yes 201081694 2673 118431215
chr1 201084368 201084372 LFA1 TRANSFAC yes 201081694 2674 118431216
chr1 201084373 201084388 TFAP2A JASPAR yes 201081694 2679 118431217
chr1 201084376 201084388 TFAP2A JASPAR yes 201081694 2682 118431218
chr1 201084376 201084388 TFAP2B JASPAR yes 201081694 2682 118431219
chr1 201084376 201084388 TFAP2C JASPAR yes 201081694 2682 118431220
chr1 201084376 201084391 TFAP2A JASPAR yes 201081694 2682 118431221
chr1 201084376 201084391 TFAP2C JASPAR yes 201081694 2682 118431222
chr1 201084385 201084400 ZIC3 JASPAR yes 201081694 2691 118431223
chr1 201084385 201084400 ZIC4 JASPAR yes 201081694 2691 118431224
chr1 201084386 201084400 GLIS2 JASPAR yes 201081694 2692 118431225
chr1 201084386 201084400 GLIS3 JASPAR yes 201081694 2692 118431226
chr1 201084386 201084400 ZIC1 JASPAR yes 201081694 2692 118431227
chr1 201084389 201084394 SP1 TRANSFAC yes 201081694 2695 118431228
chr1 201084389 201084395 SP1 TRANSFAC yes 201081694 2695 118431229
chr1 201084392 201084406 PLAG1 JASPAR yes 201081694 2698 118431230
chr1 201084393 201084403 SP1 JASPAR yes 201081694 2699 118431231
chr1 201084394 201084404 SP1 JASPAR yes 201081694 2700 118431232
chr1 201084395 201084399 LFA1 TRANSFAC yes 201081694 2701 118431233
chr1 201084404 201084417 TFAP2B JASPAR yes 201081694 2710 118431234
chr1 201084411 201084421 SP1 JASPAR yes 201081694 2717 118431235
chr1 201084412 201084422 SP1 JASPAR yes 201081694 2718 118431236
chr1 201084413 201084419 MAZ TRANSFAC yes 201081694 2719 118431237
chr1 201084419 201084423 LFA1 TRANSFAC yes 201081694 2725 118431238
chr1 201084419 201084431 CREB1 JASPAR yes 201081694 2725 118431239
chr1 201084426 201084431 SP1 TRANSFAC yes 201081694 2732 118431240
chr1 201084428 201084440 NHLH1 JASPAR yes 201081694 2734 118431241
chr1 201084429 201084439 NHLH1 JASPAR yes 201081694 2735 118431242
chr1 201084438 201084450 NHLH1 JASPAR yes 201081694 2744 118431243
chr1 201084439 201084449 NHLH1 JASPAR yes 201081694 2745 118431244
chr1 201084446 201084457 NFKB1 JASPAR yes 201081694 2752 118431245
chr1 201084448 201084453 SP1 TRANSFAC yes 201081694 2754 118431246
chr1 201084450 201084461 EBF1 JASPAR yes 201081694 2756 118431247
chr1 201084450 201084463 TFAP2B JASPAR yes 201081694 2756 118431248
chr1 201084452 201084466 PLAG1 JASPAR yes 201081694 2758 118431249
chr1 201084466 201084470 H4TF2 TRANSFAC yes 201081694 2772 118431250
chr1 201084488 201084509 REST JASPAR yes 201081694 2794 118431251
chr1 201084501 201084515 MTF1 JASPAR yes 201081694 2807 118431252
SNPs associated with CACNA1S[ENSG00000081248.6], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 200197538 rs12128213 A G 811104 Esophagus 0.302153 845554
chr1 201073476 rs12408707 A T 0 Spleen 0.308868 851024
Details of CACNA1S[ENSG00000081248.6]
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Genomic Location chr1:201008642-201081694[-]
TSS 201081694
Gene Name CACNA1S
Ensembl ID ENSG00000081248.6
ENTREZID 779
Uniprot
B1ALM3
Q13698
Protein Name
Voltage-dependent L-type calcium channel subunit alpha
Voltage-dependent L-type calcium channel subunit alpha-1S
Expression levels of CACNA1S[ENSG00000081248.6]
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