EnhancerDB
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Enhancers that regulate MCOLN1[ENSG00000090674.11]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr19 7469445 7495915 enh17893 7587512 91597
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
chr19 7520114 7524366 enh86297 7587512 63146
Colon (HCT116)
chr19 7525376 7525563 vista28480 7587512 61949
VISTA
chr19 7542222 7546742 enh89921 7587512 40770
Prostate (RWPE1)
chr19 7547395 7547510 vista28481 7587512 40002
VISTA
chr19 7547905 7548376 vista28482 7587512 39136
VISTA
chr19 7559450 7559827 vista28483 7587512 27685
VISTA
chr19 7563641 7563779 vista28484 7587512 23733
VISTA
chr19 7588336 7588755 vista28485 7587512 824
VISTA
chr19 7605825 7613055 enh109824 7587512 18313
Cervix (HeLa-S3) Stomach
chr19 7608551 7608716 vista28486 7587512 21039
VISTA
chr19 7609600 7609849 vista28487 7587512 22088
VISTA
chr19 7633848 7638338 enh58843 7587512 46336
Skin (Keratinocyte)
chr19 7638372 7642668 enh86298 7587512 50860
Colon (HCT116)
chr19 7665007 7665263 vista28488 7587512 77495
VISTA
chr19 7665558 7669955 enh86299 7587512 78046
Pancreas Thyroid Colon (HCT116) Stomach
Transcript facotrs that regulate MCOLN1[ENSG00000090674.11]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr19 7587850 7588366 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 7587512 338 108381271
chr19 7587861 7588391 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 7587512 349 108381272
chr19 7588346 7588361 HNF4A JASPAR yes 7587512 834 70797126
chr19 7588347 7588362 HNF4G JASPAR yes 7587512 835 70797127
chr19 7588347 7588362 TFAP2A JASPAR yes 7587512 835 70797128
chr19 7588357 7588363 SOX10 JASPAR yes 7587512 845 70797129
chr19 7588359 7588373 FOXF2 JASPAR yes 7587512 847 70797130
chr19 7588360 7588371 HOXC11 JASPAR yes 7587512 848 70797131
chr19 7588360 7588371 HOXC12 JASPAR yes 7587512 848 70797132
chr19 7588360 7588371 HOXC13 JASPAR yes 7587512 848 70797133
chr19 7588360 7588371 HOXD12 JASPAR yes 7587512 848 70797134
chr19 7588361 7588371 HOXC10 JASPAR yes 7587512 849 70797135
chr19 7588361 7588371 HOXD11 JASPAR yes 7587512 849 70797136
chr19 7588364 7588371 FOXD2 JASPAR yes 7587512 852 70797137
chr19 7588364 7588371 FOXI1 JASPAR yes 7587512 852 70797138
chr19 7588364 7588371 FOXL1 JASPAR yes 7587512 852 70797139
chr19 7588364 7588371 FOXO4 JASPAR yes 7587512 852 70797140
chr19 7588364 7588371 FOXO6 JASPAR yes 7587512 852 70797141
chr19 7588364 7588371 FOXP3 JASPAR yes 7587512 852 70797142
chr19 7588364 7588372 FOXD1 JASPAR yes 7587512 852 70797143
chr19 7588364 7588372 FOXO3 JASPAR yes 7587512 852 70797144
chr19 7588389 7588395 TCF4 TRANSFAC yes 7587512 877 70797145
chr19 7588395 7588401 MAZ TRANSFAC yes 7587512 883 70797146
chr19 7588399 7588404 SP1 TRANSFAC yes 7587512 887 70797147
chr19 7588399 7588406 SP1 TRANSFAC yes 7587512 887 70797148
chr19 7588448 7588452 YY1 TRANSFAC yes 7587512 936 70797149
chr19 7588452 7588457 GATA2 JASPAR yes 7587512 940 70797150
chr19 7588463 7588469 TCF4 TRANSFAC yes 7587512 951 70797151
chr19 7588470 7588484 TLX1 JASPAR yes 7587512 958 70797152
chr19 7588480 7588497 BCL6B JASPAR yes 7587512 968 70797153
chr19 7588501 7588506 SP1 TRANSFAC yes 7587512 989 70797154
chr19 7588505 7588522 BCL6B JASPAR yes 7587512 993 70797155
chr19 7588523 7588537 EBF1 JASPAR yes 7587512 1011 70797156
chr19 7588524 7588530 MZF1 JASPAR yes 7587512 1012 70797157
chr19 7588524 7588535 EBF1 JASPAR yes 7587512 1012 70797158
chr19 7588525 7588536 EBF1 JASPAR yes 7587512 1013 70797159
chr19 7588528 7588538 GCM2 JASPAR yes 7587512 1016 70797160
chr19 7588529 7588539 ZNF740 JASPAR yes 7587512 1017 70797161
chr19 7588532 7588543 TBX2 JASPAR yes 7587512 1020 70797162
chr19 7588533 7588541 MGA JASPAR yes 7587512 1021 70797163
chr19 7588533 7588541 TBX15 JASPAR yes 7587512 1021 70797164
chr19 7588533 7588541 TBX1 JASPAR yes 7587512 1021 70797165
chr19 7588533 7588541 TBX4 JASPAR yes 7587512 1021 70797166
chr19 7588533 7588541 TBX5 JASPAR yes 7587512 1021 70797167
chr19 7588533 7588543 TBR1 JASPAR yes 7587512 1021 70797168
chr19 7588533 7588547 PLAG1 JASPAR yes 7587512 1021 70797169
chr19 7588537 7588545 MEIS3 JASPAR yes 7587512 1025 70797170
chr19 7588553 7588571 ESR1 JASPAR yes 7587512 1041 70797171
chr19 7588582 7588587 MYC TRANSFAC yes 7587512 1070 70797172
chr19 7588603 7588606 MYB TRANSFAC yes 7587512 1091 70797173
chr19 7588604 7588613 VENTX JASPAR yes 7587512 1092 70797174
chr19 7588607 7588611 YY1 TRANSFAC yes 7587512 1095 70797175
chr19 7588608 7588622 E2F7 JASPAR yes 7587512 1096 70797176
chr19 7588613 7588623 NFATC3 JASPAR yes 7587512 1101 70797177
chr19 7588615 7588622 NFATC2 JASPAR yes 7587512 1103 70797178
chr19 7588619 7588633 FOXF2 JASPAR yes 7587512 1107 70797179
chr19 7588619 7588634 FOXP1 JASPAR yes 7587512 1107 70797180
chr19 7588620 7588631 FOXA1 JASPAR yes 7587512 1108 70797181
chr19 7588620 7588635 FOXA1 JASPAR yes 7587512 1108 70797182
chr19 7588620 7588636 SOX8 JASPAR yes 7587512 1108 70797183
chr19 7588621 7588633 FOXC2 JASPAR yes 7587512 1109 70797184
chr19 7588622 7588633 FOXP2 JASPAR yes 7587512 1110 70797185
chr19 7588636 7588651 AR JASPAR yes 7587512 1124 70797186
chr19 7588637 7588649 TAL1 JASPAR yes 7587512 1125 70797187
chr19 7588639 7588649 MSC JASPAR yes 7587512 1127 70797188
chr19 7588648 7588659 FOXA1 JASPAR yes 7587512 1136 70797189
chr19 7588660 7588674 GATA2 JASPAR yes 7587512 1148 70797190
chr19 7588664 7588672 GATA3 JASPAR yes 7587512 1152 70797191
chr19 7588734 7588755 IRF1 JASPAR yes 7587512 1222 70797192
chr19 7588736 7588751 STAT2 JASPAR yes 7587512 1224 70797193
chr19 7588739 7588754 FOXP1 JASPAR yes 7587512 1227 70797194
chr19 7588740 7588755 FOXP1 JASPAR yes 7587512 1228 70797195
SNPs associated with MCOLN1[ENSG00000090674.11], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr19 8415351 rs62117485 G A 816456 Esophagus 0.349498 5428118
chr19 7231644 rs7255710 G A 355868 Esophagus 0.177898 5419954
chr19 7137138 rs7256474 T C 450374 Esophagus 0.127625 5418969
chr19 7641784 rs113156062 T G 42889 Ovary 0.432288 5423015
chr19 7142064 rs140361295 C T 445448 Thyroid 0.248246 5419023
chr19 6612555 rs10084116 A G 974957 Liver 0.409045 5415970
chr19 7105136 rs2967657 A G 482376 Stomach 0.432813 5418733
Details of MCOLN1[ENSG00000090674.11]
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Genomic Location chr19:7587512-7598895[+]
TSS 7587512
Gene Name MCOLN1
Ensembl ID ENSG00000090674.11
ENTREZID 57192
Uniprot
Q9GZU1
Protein Name
Mucolipin-1
Expression levels of MCOLN1[ENSG00000090674.11]
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