EnhancerDB
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Enhancers that regulate PGC[ENSG00000096088.12]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr6 41623844 41623904 vista51925 41721847 97943
VISTA
chr6 41641145 41645381 enh46124 41721847 76466
Muscle (Myotube)
chr6 41649853 41650127 vista51926 41721847 71720
VISTA
chr6 41659265 41671255 enh23243 41721847 50592
Cervix (HeLa-S3) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Lung (PC-9) Muscle (Myoblast) Heart
chr6 41661673 41661892 vista51927 41721847 59955
VISTA
chr6 41672005 41699742 enh9103 41721847 22105
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr6 41672440 41672821 vista51928 41721847 49026
VISTA
chr6 41674655 41674829 vista51929 41721847 47018
VISTA
chr6 41675584 41675662 vista51930 41721847 46185
VISTA
chr6 41686086 41686432 vista51931 41721847 35415
VISTA
chr6 41696174 41696539 vista51932 41721847 25308
VISTA
chr6 41698347 41698506 vista51933 41721847 23341
VISTA
chr6 41725185 41737455 enh9104 41721847 3338
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Lung Stomach Placenta Blood (Karpas-422) Pancreas Uterus Heart
chr6 41780485 41788615 enh9105 41721847 58638
Bone Marrow (K562) Muscle (A673) Thymus Blood (Karpas-422)
chr6 41790965 41795155 enh84160 41721847 69118
Prostate (PC-3) Lung (PC-9) Epithelial (MCF-7)
chr6 41801845 41807755 enh9106 41721847 79998
Peripheral Blood (MM.1S) Blood (Karpas-422)
chr6 41812296 41816971 enh23244 41721847 90449
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Lung (PC-9) Pancreas Spleen Muscle (Myotube) Thymus Epithelial (MCF-7)
chr6 41818425 41826875 enh9107 41721847 96578
Bone Marrow (K562) Peripheral Blood (MM.1S) Blood (Karpas-422)
Transcript facotrs that regulate PGC[ENSG00000096088.12]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with PGC[ENSG00000096088.12], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr6 41590918 rs2842637 A T 113531 Esophagus 0.325796 9026773
chr6 41920579 rs74979086 C T 198732 Esophagus 0.261467 9028544
chr6 42364634 rs111465910 T C 642787 Heart 0.302408 9032563
chr6 42009583 rs4333413 G A,T 287736 Heart 0.131002 9029469
chr6 41715241 rs138202520 C T 0 Pancreas 1.54336e-08 9027646
chr6 40927795 rs4714409 A G 776654 Breast 0.388453 9022670
chr6 41928132 rs9471698 C A 206285 Liver 0.0588972 9028630
Details of PGC[ENSG00000096088.12]
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Genomic Location chr6:41704449-41721847[-]
TSS 41721847
Gene Name PGC
Ensembl ID ENSG00000096088.12
ENTREZID 5225
Uniprot
P20142
Protein Name
Gastricsin
Expression levels of PGC[ENSG00000096088.12]
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