EnhancerDB
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Enhancers that regulate NOVA2[ENSG00000104967.6]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr19 46376585 46388275 enh18108 46476804 88529
Stomach Placenta Colon (HCT116) Pancreas Uterus Epithelial (MCF-7)
chr19 46379598 46379943 vista29617 46476804 96861
VISTA
chr19 46385401 46385465 vista29618 46476804 91339
VISTA
chr19 46386037 46386278 vista29619 46476804 90526
VISTA
chr19 46394802 46401035 enh52900 46476804 75769
Blood (OCI-LY7) Liver (HepG2) Large Intestine
chr19 46398825 46399093 vista29620 46476804 77711
VISTA
chr19 46428847 46433403 enh91231 46476804 43401
Bone Marrow (K562) Pancreas (Panc1) Cervix (HeLa-S3)
chr19 46437050 46437156 vista29621 46476804 39648
VISTA
chr19 46454458 46461935 enh62732 46476804 14869
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Esophagus Lung Stomach Lung (PC-9) Uterus Heart
chr19 46478594 46479000 vista29622 46476804 1790
VISTA
chr19 46501087 46505285 enh89947 46476804 24283
Prostate (RWPE1)
chr19 46504246 46504437 vista29623 46476804 27442
VISTA
chr19 46511965 46516575 enh5177 46476804 35161
Blood (Karpas-422)
chr19 46533136 46537494 enh44668 46476804 56332
Muscle (Myotube)
chr19 46538081 46542241 enh44669 46476804 61277
Muscle (Myotube)
chr19 46557675 46562217 enh89948 46476804 80871
Liver (HepG2) Prostate (RWPE1)
chr19 46566787 46579035 enh18109 46476804 89983
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Lung (PC-9)
Transcript facotrs that regulate NOVA2[ENSG00000104967.6]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr19 46478190 46479005 ZBTB33 GTRD no Lung (A549) 46476804 1386 108417387
chr19 46478191 46478819 ZNF274 GTRD no Bone Marrow (K562) 46476804 1387 108417388
chr19 46478195 46478909 STAT3 GTRD no Blood (OCI-LY7) 46476804 1391 108417389
chr19 46478225 46479103 ZNF274 GTRD no Blood (GM12878) 46476804 1421 108417390
chr19 46478279 46478694 MYOD GTRD no Muscle (Myoblast) 46476804 1475 108417391
chr19 46478293 46478825 ZNF274 GTRD no Bone Marrow (K562) 46476804 1489 108417392
chr19 46478299 46478784 ZNF274 GTRD no Blood (GM12878) 46476804 1495 108417393
chr19 46478626 46478647 ZNF263 JASPAR yes 46476804 1822 70859249
chr19 46478629 46478650 ZNF263 JASPAR yes 46476804 1825 70859250
chr19 46478631 46478641 ZNF740 JASPAR yes 46476804 1827 70859251
chr19 46478631 46478646 ZIC3 JASPAR yes 46476804 1827 70859252
chr19 46478632 46478642 SP1 JASPAR yes 46476804 1828 70859253
chr19 46478632 46478642 ZNF740 JASPAR yes 46476804 1828 70859254
chr19 46478632 46478653 ZNF263 JASPAR yes 46476804 1828 70859255
chr19 46478633 46478643 ZNF740 JASPAR yes 46476804 1829 70859256
chr19 46478635 46478649 PLAG1 JASPAR yes 46476804 1831 70859257
chr19 46478642 46478663 ZNF263 JASPAR yes 46476804 1838 70859258
chr19 46478665 46478669 H4TF2 TRANSFAC yes 46476804 1861 70859259
chr19 46478667 46478673 MZF1 JASPAR yes 46476804 1863 70859260
chr19 46478673 46478683 MZF1 JASPAR yes 46476804 1869 70859261
chr19 46478677 46478687 SP1 JASPAR yes 46476804 1873 70859262
chr19 46478679 46478685 MAZ TRANSFAC yes 46476804 1875 70859263
chr19 46478687 46478699 TAL1 JASPAR yes 46476804 1883 70859264
chr19 46478691 46478697 YY1 JASPAR yes 46476804 1887 70859265
chr19 46478693 46478713 RREB1 JASPAR yes 46476804 1889 70859266
chr19 46478700 46478714 PLAG1 JASPAR yes 46476804 1896 70859267
chr19 46478702 46478708 ZNF354C JASPAR yes 46476804 1898 70859268
chr19 46478716 46478737 ZNF263 JASPAR yes 46476804 1912 70859269
chr19 46478723 46478727 NFE TRANSFAC yes 46476804 1919 70859270
chr19 46478727 46478733 SP1 TRANSFAC yes 46476804 1923 70859271
chr19 46478727 46478737 SP1 JASPAR yes 46476804 1923 70859272
chr19 46478728 46478738 SP1 JASPAR yes 46476804 1924 70859273
chr19 46478728 46478749 ZNF263 JASPAR yes 46476804 1924 70859274
chr19 46478731 46478741 ZNF740 JASPAR yes 46476804 1927 70859275
chr19 46478731 46478745 ZIC1 JASPAR yes 46476804 1927 70859276
chr19 46478731 46478746 ZIC4 JASPAR yes 46476804 1927 70859277
chr19 46478737 46478746 SOX9 JASPAR yes 46476804 1933 70859278
chr19 46478742 46478753 EBF1 JASPAR yes 46476804 1938 70859279
chr19 46478743 46478749 MZF1 JASPAR yes 46476804 1939 70859280
chr19 46478756 46478766 SP1 JASPAR yes 46476804 1952 70859281
chr19 46478761 46478771 SP1 JASPAR yes 46476804 1957 70859282
chr19 46478763 46478769 MAZ TRANSFAC yes 46476804 1959 70859283
chr19 46478776 46478780 H4TF2 TRANSFAC yes 46476804 1972 70859284
chr19 46478792 46478813 ZNF263 JASPAR yes 46476804 1988 70859285
chr19 46478796 46478806 MZF1 JASPAR yes 46476804 1992 70859286
chr19 46478799 46478805 SP1 TRANSFAC yes 46476804 1995 70859287
chr19 46478800 46478812 YY1 JASPAR yes 46476804 1996 70859288
chr19 46478828 46478847 RFX2 JASPAR yes 46476804 2024 70859289
chr19 46478830 46478845 RFX5 JASPAR yes 46476804 2026 70859290
chr19 46478832 46478848 RFX2 JASPAR yes 46476804 2028 70859291
chr19 46478832 46478848 RFX3 JASPAR yes 46476804 2028 70859292
chr19 46478832 46478848 RFX4 JASPAR yes 46476804 2028 70859293
chr19 46478832 46478848 RFX5 JASPAR yes 46476804 2028 70859294
chr19 46478833 46478852 RFX2 JASPAR yes 46476804 2029 70859295
chr19 46478846 46478851 TFAP2A TRANSFAC yes 46476804 2042 70859296
chr19 46478846 46478852 MZF1 JASPAR yes 46476804 2042 70859297
chr19 46478848 46478853 ETS2 TRANSFAC yes 46476804 2044 70859298
chr19 46478863 46478868 GATA2 JASPAR yes 46476804 2059 70859299
chr19 46478870 46478887 RARA JASPAR yes 46476804 2066 70859300
chr19 46478882 46478886 ESR1 TRANSFAC yes 46476804 2078 70859301
chr19 46478896 46478904 TBX5 JASPAR yes 46476804 2092 70859302
chr19 46478913 46478924 BATF JASPAR yes 46476804 2109 70859303
chr19 46478926 46478936 SREBF1 JASPAR yes 46476804 2122 70859304
chr19 46478927 46478935 MGA JASPAR yes 46476804 2123 70859305
chr19 46478928 46478943 RUNX2 JASPAR yes 46476804 2124 70859306
chr19 46478945 46478950 GATA2 JASPAR yes 46476804 2141 70859307
chr19 46478977 46478987 MZF1 JASPAR yes 46476804 2173 70859308
SNPs associated with NOVA2[ENSG00000104967.6], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
Details of NOVA2[ENSG00000104967.6]
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Genomic Location chr19:46436992-46476804[-]
TSS 46476804
Gene Name NOVA2
Ensembl ID ENSG00000104967.6
ENTREZID 4858
Uniprot
Q9UNW9
Protein Name
NOVA2 [amino acids 1-28]
RNA-binding protein Nova-2
Expression levels of NOVA2[ENSG00000104967.6]
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