EnhancerDB
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Enhancers that regulate LIM2[ENSG00000105370.3]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr19 51794334 51801967 enh69568 51891214 89247
Neural Stem Cells (H9) Embryonic Stem Cell Line (H1-hESC)
chr19 51796169 51796569 vista29839 51891214 94645
VISTA
chr19 51797467 51797679 vista29840 51891214 93535
VISTA
chr19 51815926 51816289 vista29841 51891214 74925
VISTA
chr19 51822319 51822684 vista29842 51891214 68530
VISTA
chr19 51860584 51868527 enh32978 51891214 22687
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Colon (HCT116) Lung (PC-9) Pancreas Epithelial (MCF-7)
chr19 51895210 51904155 enh5206 51891214 3996
Blood (OCI-LY7) Prostate (RWPE1) Brain (SK-N-MC) Blood (Karpas-422)
chr19 51896075 51896247 vista29843 51891214 4861
VISTA
chr19 51898753 51899047 vista29844 51891214 7539
VISTA
chr19 51909093 51913243 enh69569 51891214 17879
Neural Stem Cells (H9)
chr19 51909569 51909701 vista29845 51891214 18355
VISTA
chr19 51930485 51930778 vista29846 51891214 39271
VISTA
chr19 51934392 51934883 vista29847 51891214 43178
VISTA
chr19 51937810 51937998 vista29848 51891214 46596
VISTA
chr19 51938637 51939150 vista29849 51891214 47423
VISTA
chr19 51942385 51947355 enh48204 51891214 51171
Bone Marrow (K562) Thymus Blood (T-cell)
chr19 51944053 51944530 vista29850 51891214 52839
VISTA
chr19 51944873 51945376 vista29851 51891214 53659
VISTA
chr19 51964450 51964623 vista29852 51891214 73236
VISTA
chr19 51964906 51965339 vista29853 51891214 73692
VISTA
chr19 51965565 51965613 vista29854 51891214 74351
VISTA
chr19 51971340 51971606 vista29855 51891214 80126
VISTA
chr19 51971719 51972098 vista29856 51891214 80505
VISTA
chr19 51972517 51972837 vista29857 51891214 81303
VISTA
chr19 51976564 51976794 vista29858 51891214 85350
VISTA
chr19 51989599 51989897 vista29859 51891214 98385
VISTA
Transcript facotrs that regulate LIM2[ENSG00000105370.3]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr19 51895215 51895228 SMAD2 JASPAR yes 51891214 4001 113774087
chr19 51895223 51895233 ID4 JASPAR yes 51891214 4009 113774088
chr19 51895223 51895233 TCF3 JASPAR yes 51891214 4009 113774089
chr19 51895223 51895233 TCF4 JASPAR yes 51891214 4009 113774090
chr19 51895224 51895233 SNAI2 JASPAR yes 51891214 4010 113774091
chr19 51895225 51895230 USF2 TRANSFAC yes 51891214 4011 113774092
chr19 51895286 51895303 ESR1 JASPAR yes 51891214 4072 113774093
chr19 51895295 51895305 SREBF1 JASPAR yes 51891214 4081 113774094
chr19 51895326 51895345 PAX5 JASPAR yes 51891214 4112 113774095
chr19 51895328 51895332 LFA1 TRANSFAC yes 51891214 4114 113774096
chr19 51895346 51895350 NFE TRANSFAC yes 51891214 4132 113774097
chr19 51895348 51895363 MEF2C JASPAR yes 51891214 4134 113774098
chr19 51895349 51895364 MEF2A JASPAR yes 51891214 4135 113774099
chr19 51895352 51895366 FOXF2 JASPAR yes 51891214 4138 113774100
chr19 51895352 51895366 ONECUT2 JASPAR yes 51891214 4138 113774101
chr19 51895352 51895366 ONECUT3 JASPAR yes 51891214 4138 113774102
chr19 51895352 51895367 FOXP1 JASPAR yes 51891214 4138 113774103
chr19 51895353 51895368 FOXA1 JASPAR yes 51891214 4139 113774104
chr19 51895354 51895365 FOXB1 JASPAR yes 51891214 4140 113774105
chr19 51895354 51895365 FOXC1 JASPAR yes 51891214 4140 113774106
chr19 51895354 51895366 FOXC2 JASPAR yes 51891214 4140 113774107
chr19 51895355 51895367 FOXI1 JASPAR yes 51891214 4141 113774108
chr19 51895361 51895375 ONECUT2 JASPAR yes 51891214 4147 113774109
chr19 51895361 51895375 ONECUT3 JASPAR yes 51891214 4147 113774110
chr19 51895361 51895376 FOXP1 JASPAR yes 51891214 4147 113774111
chr19 51895362 51895377 FOXA1 JASPAR yes 51891214 4148 113774112
chr19 51895363 51895374 FOXB1 JASPAR yes 51891214 4149 113774113
chr19 51895363 51895374 FOXC1 JASPAR yes 51891214 4149 113774114
chr19 51895363 51895375 FOXC2 JASPAR yes 51891214 4149 113774115
chr19 51895364 51895376 FOXI1 JASPAR yes 51891214 4150 113774116
chr19 51895365 51895379 ONECUT2 JASPAR yes 51891214 4151 113774117
chr19 51895365 51895379 ONECUT3 JASPAR yes 51891214 4151 113774118
chr19 51895365 51895380 FOXP1 JASPAR yes 51891214 4151 113774119
chr19 51895365 51895380 HNF1A JASPAR yes 51891214 4151 113774120
chr19 51895366 51895380 POU4F1 JASPAR yes 51891214 4152 113774121
chr19 51895366 51895381 FOXA1 JASPAR yes 51891214 4152 113774122
chr19 51895366 51895382 POU4F2 JASPAR yes 51891214 4152 113774123
chr19 51895366 51895382 POU4F3 JASPAR yes 51891214 4152 113774124
chr19 51895367 51895378 FOXB1 JASPAR yes 51891214 4153 113774125
chr19 51895367 51895378 FOXC1 JASPAR yes 51891214 4153 113774126
chr19 51895367 51895378 PROP1 JASPAR yes 51891214 4153 113774127
chr19 51895367 51895379 FOXC2 JASPAR yes 51891214 4153 113774128
chr19 51895368 51895380 FOXI1 JASPAR yes 51891214 4154 113774129
chr19 51895369 51895383 ONECUT2 JASPAR yes 51891214 4155 113774130
chr19 51895369 51895383 ONECUT3 JASPAR yes 51891214 4155 113774131
chr19 51895369 51895384 FOXP1 JASPAR yes 51891214 4155 113774132
chr19 51895369 51895384 HNF1A JASPAR yes 51891214 4155 113774133
chr19 51895370 51895384 POU4F1 JASPAR yes 51891214 4156 113774134
chr19 51895370 51895385 FOXA1 JASPAR yes 51891214 4156 113774135
chr19 51895370 51895386 POU4F2 JASPAR yes 51891214 4156 113774136
chr19 51895370 51895386 POU4F3 JASPAR yes 51891214 4156 113774137
chr19 51895371 51895382 FOXB1 JASPAR yes 51891214 4157 113774138
chr19 51895371 51895382 FOXC1 JASPAR yes 51891214 4157 113774139
chr19 51895371 51895382 PROP1 JASPAR yes 51891214 4157 113774140
chr19 51895371 51895383 FOXC2 JASPAR yes 51891214 4157 113774141
chr19 51895372 51895384 FOXI1 JASPAR yes 51891214 4158 113774142
chr19 51895373 51895387 ONECUT2 JASPAR yes 51891214 4159 113774143
chr19 51895373 51895387 ONECUT3 JASPAR yes 51891214 4159 113774144
chr19 51895373 51895388 FOXP1 JASPAR yes 51891214 4159 113774145
chr19 51895373 51895388 HNF1A JASPAR yes 51891214 4159 113774146
chr19 51895374 51895388 POU4F1 JASPAR yes 51891214 4160 113774147
chr19 51895374 51895389 FOXA1 JASPAR yes 51891214 4160 113774148
chr19 51895374 51895390 POU4F3 JASPAR yes 51891214 4160 113774149
chr19 51895375 51895386 FOXB1 JASPAR yes 51891214 4161 113774150
chr19 51895375 51895386 FOXC1 JASPAR yes 51891214 4161 113774151
chr19 51895375 51895386 PROP1 JASPAR yes 51891214 4161 113774152
chr19 51895375 51895387 FOXC2 JASPAR yes 51891214 4161 113774153
chr19 51895376 51895388 FOXI1 JASPAR yes 51891214 4162 113774154
chr19 51895379 51895394 MEF2C JASPAR yes 51891214 4165 113774155
chr19 51895380 51895395 MEF2A JASPAR yes 51891214 4166 113774156
chr19 51895381 51895393 MEF2B JASPAR yes 51891214 4167 113774157
chr19 51895381 51895393 MEF2D JASPAR yes 51891214 4167 113774158
chr19 51895393 51895412 PAX5 JASPAR yes 51891214 4179 113774159
chr19 51895401 51895421 TP53 JASPAR yes 51891214 4187 113774160
chr19 51895403 51895423 TP63 JASPAR yes 51891214 4189 113774161
chr19 51895404 51895422 TP53 JASPAR yes 51891214 4190 113774162
chr19 51895404 51895422 TP63 JASPAR yes 51891214 4190 113774163
chr19 51895404 51895422 TP73 JASPAR yes 51891214 4190 113774164
chr19 51895405 51895425 TP53 JASPAR yes 51891214 4191 113774165
chr19 51895409 51895414 SP1 TRANSFAC yes 51891214 4195 113774166
chr19 51895411 51895431 TP53 JASPAR yes 51891214 4197 113774167
chr19 51895413 51895417 LFA1 TRANSFAC yes 51891214 4199 113774168
chr19 51895467 51895478 EBF1 JASPAR yes 51891214 4253 113774169
chr19 51895472 51895482 SP1 JASPAR yes 51891214 4258 113774170
chr19 51895474 51895479 SP1 TRANSFAC yes 51891214 4260 113774171
chr19 51895488 51895498 SREBF1 JASPAR yes 51891214 4274 113774172
chr19 51895497 51895503 YY1 JASPAR yes 51891214 4283 113774173
chr19 51895543 51895558 FOXP1 JASPAR yes 51891214 4329 113774174
chr19 51895544 51895559 FOXP1 JASPAR yes 51891214 4330 113774175
chr19 51895545 51895560 FOXP1 JASPAR yes 51891214 4331 113774176
chr19 51895545 51895566 IRF1 JASPAR yes 51891214 4331 113774177
chr19 51895546 51895561 FOXP1 JASPAR yes 51891214 4332 113774178
chr19 51895546 51895567 IRF1 JASPAR yes 51891214 4332 113774179
chr19 51895547 51895562 FOXP1 JASPAR yes 51891214 4333 113774180
chr19 51895547 51895568 IRF1 JASPAR yes 51891214 4333 113774181
chr19 51895548 51895563 FOXP1 JASPAR yes 51891214 4334 113774182
chr19 51895548 51895569 IRF1 JASPAR yes 51891214 4334 113774183
chr19 51895549 51895564 FOXP1 JASPAR yes 51891214 4335 113774184
chr19 51895549 51895570 IRF1 JASPAR yes 51891214 4335 113774185
chr19 51895550 51895565 FOXP1 JASPAR yes 51891214 4336 113774186
chr19 51895550 51895571 IRF1 JASPAR yes 51891214 4336 113774187
chr19 51895551 51895566 FOXP1 JASPAR yes 51891214 4337 113774188
chr19 51895551 51895572 IRF1 JASPAR yes 51891214 4337 113774189
chr19 51895552 51895567 FOXP1 JASPAR yes 51891214 4338 113774190
chr19 51895552 51895573 IRF1 JASPAR yes 51891214 4338 113774191
chr19 51895553 51895568 FOXP1 JASPAR yes 51891214 4339 113774192
chr19 51895554 51895575 IRF1 JASPAR yes 51891214 4340 113774193
chr19 51895555 51895570 FOXP1 JASPAR yes 51891214 4341 113774194
chr19 51895556 51895577 IRF1 JASPAR yes 51891214 4342 113774195
chr19 51895565 51895581 POU4F2 JASPAR yes 51891214 4351 113774196
chr19 51895565 51895581 POU4F3 JASPAR yes 51891214 4351 113774197
chr19 51895566 51895582 POU4F3 JASPAR yes 51891214 4352 113774198
chr19 51895568 51895582 POU4F1 JASPAR yes 51891214 4354 113774199
chr19 51895568 51895583 HNF1A JASPAR yes 51891214 4354 113774200
chr19 51895570 51895576 TBP TRANSFAC yes 51891214 4356 113774201
chr19 51895578 51895585 POU2F1 TRANSFAC yes 51891214 4364 113774202
chr19 51895583 51895591 GATA3 JASPAR yes 51891214 4369 113774203
chr19 51895583 51895591 GATA5 JASPAR yes 51891214 4369 113774204
chr19 51895602 51895619 ZNF410 JASPAR yes 51891214 4388 113774205
chr19 51895606 51895617 STAT1 JASPAR yes 51891214 4392 113774206
chr19 51895606 51895617 STAT3 JASPAR yes 51891214 4392 113774207
chr19 51895611 51895616 ETS2 TRANSFAC yes 51891214 4397 113774208
chr19 51895612 51895627 HSF1 JASPAR yes 51891214 4398 113774209
chr19 51895613 51895626 HSF1 JASPAR yes 51891214 4399 113774210
chr19 51895613 51895626 HSF2 JASPAR yes 51891214 4399 113774211
chr19 51895613 51895626 HSF4 JASPAR yes 51891214 4399 113774212
chr19 51895646 51895651 TFAP2A TRANSFAC yes 51891214 4432 113774213
chr19 51895646 51895652 MZF1 JASPAR yes 51891214 4432 113774214
chr19 51895648 51895654 MAZ TRANSFAC yes 51891214 4434 113774215
chr19 51895648 51895659 E2F6 JASPAR yes 51891214 4434 113774216
chr19 51895655 51895665 MSC JASPAR yes 51891214 4441 113774217
chr19 51895660 51895681 IRF1 JASPAR yes 51891214 4446 113774218
chr19 51895663 51895677 IRF7 JASPAR yes 51891214 4449 113774219
chr19 51895664 51895679 STAT2 JASPAR yes 51891214 4450 113774220
chr19 51895665 51895677 IRF1 JASPAR yes 51891214 4451 113774221
chr19 51895673 51895688 SOX21 JASPAR yes 51891214 4459 113774222
chr19 51895678 51895692 JUN JASPAR yes 51891214 4464 113774223
chr19 51895681 51895692 FOSL2 JASPAR yes 51891214 4467 113774224
chr19 51895681 51895692 JUNB JASPAR yes 51891214 4467 113774225
chr19 51895682 51895693 JUND JASPAR yes 51891214 4468 113774226
chr19 51895694 51895704 NFATC3 JASPAR yes 51891214 4480 113774227
chr19 51895696 51895703 NFATC2 JASPAR yes 51891214 4482 113774228
chr19 51895725 51895740 FOXA1 JASPAR yes 51891214 4511 113774229
chr19 51895726 51895738 FOXI1 JASPAR yes 51891214 4512 113774230
chr19 51895727 51895739 MEF2B JASPAR yes 51891214 4513 113774231
chr19 51895727 51895739 MEF2D JASPAR yes 51891214 4513 113774232
chr19 51895728 51895739 FOXB1 JASPAR yes 51891214 4514 113774233
chr19 51895728 51895739 FOXC1 JASPAR yes 51891214 4514 113774234
chr19 51895729 51895733 YY1 TRANSFAC yes 51891214 4515 113774235
chr19 51895731 51895746 MEF2A JASPAR yes 51891214 4517 113774236
chr19 51895732 51895747 MEF2C JASPAR yes 51891214 4518 113774237
chr19 51895733 51895745 MEF2A JASPAR yes 51891214 4519 113774238
chr19 51895734 51895744 MEF2A JASPAR yes 51891214 4520 113774239
chr19 51895735 51895739 YY1 TRANSFAC yes 51891214 4521 113774240
chr19 51895753 51895766 ATF4 JASPAR yes 51891214 4539 113774241
chr19 51895754 51895765 CEBPA JASPAR yes 51891214 4540 113774242
chr19 51895755 51895766 CEBPB JASPAR yes 51891214 4541 113774243
chr19 51895763 51895776 SCRT2 JASPAR yes 51891214 4549 113774244
chr19 51895767 51895787 RREB1 JASPAR yes 51891214 4553 113774245
chr19 51895774 51895789 FOXP1 JASPAR yes 51891214 4560 113774246
chr19 51895775 51895786 FOXP2 JASPAR yes 51891214 4561 113774247
chr19 51895784 51895804 PPARG JASPAR yes 51891214 4570 113774248
chr19 51895794 51895798 H4TF2 TRANSFAC yes 51891214 4580 113774249
chr19 51895803 51895807 NFE TRANSFAC yes 51891214 4589 113774250
chr19 51895825 51895835 SREBF1 JASPAR yes 51891214 4611 113774251
chr19 51895825 51895835 SREBF2 JASPAR yes 51891214 4611 113774252
chr19 51895825 51895838 EOMES JASPAR yes 51891214 4611 113774253
chr19 51895826 51895834 MGA JASPAR yes 51891214 4612 113774254
chr19 51895872 51895893 ZNF263 JASPAR yes 51891214 4658 113774255
chr19 51895901 51895913 ZBTB7A JASPAR yes 51891214 4687 113774256
chr19 51895937 51895941 YY1 TRANSFAC yes 51891214 4723 113774257
chr19 51896001 51896015 SPIC JASPAR yes 51891214 4787 113774258
chr19 51896040 51896060 TP63 JASPAR yes 51891214 4826 113774259
chr19 51896043 51896054 NFE2 JASPAR yes 51891214 4829 113774260
chr19 51896044 51896055 FOSL2 JASPAR yes 51891214 4830 113774261
chr19 51896057 51896064 E2F1 TRANSFAC yes 51891214 4843 113774262
chr19 51896076 51896083 NKX3-1 JASPAR yes 51891214 4862 70870949
chr19 51896076 51896083 NKX3-1 JASPAR yes 51891214 4862 113774263
chr19 51896093 51896099 SOX10 JASPAR yes 51891214 4879 70870950
chr19 51896093 51896099 SOX10 JASPAR yes 51891214 4879 113774264
chr19 51896102 51896117 AR JASPAR yes 51891214 4888 70870951
chr19 51896102 51896117 AR JASPAR yes 51891214 4888 113774265
chr19 51896116 51896120 YY1 TRANSFAC yes 51891214 4902 70870952
chr19 51896116 51896120 YY1 TRANSFAC yes 51891214 4902 113774266
chr19 51896129 51896142 NFKB1 JASPAR yes 51891214 4915 70870953
chr19 51896129 51896142 NFKB1 JASPAR yes 51891214 4915 113774267
chr19 51896130 51896141 NFKB1 JASPAR yes 51891214 4916 70870954
chr19 51896130 51896141 NFKB1 JASPAR yes 51891214 4916 113774268
chr19 51896145 51896157 YY1 JASPAR yes 51891214 4931 70870955
chr19 51896145 51896157 YY1 JASPAR yes 51891214 4931 113774269
chr19 51896148 51896154 YY1 JASPAR yes 51891214 4934 70870956
chr19 51896148 51896154 YY1 JASPAR yes 51891214 4934 113774270
chr19 51896181 51896185 YY1 TRANSFAC yes 51891214 4967 70870957
chr19 51896181 51896185 YY1 TRANSFAC yes 51891214 4967 113774271
chr19 51896181 51896192 FOSL1 JASPAR yes 51891214 4967 70870958
chr19 51896181 51896192 JUND JASPAR yes 51891214 4967 70870959
chr19 51896181 51896192 FOSL1 JASPAR yes 51891214 4967 113774272
chr19 51896181 51896192 JUND JASPAR yes 51891214 4967 113774273
chr19 51896182 51896193 JUNB JASPAR yes 51891214 4968 70870960
chr19 51896182 51896193 JUNB JASPAR yes 51891214 4968 113774274
chr19 51896182 51896196 JUN JASPAR yes 51891214 4968 70870961
chr19 51896182 51896196 JUN JASPAR yes 51891214 4968 113774275
chr19 51896197 51896209 IRF1 JASPAR yes 51891214 4983 70870962
chr19 51896197 51896209 IRF1 JASPAR yes 51891214 4983 113774276
SNPs associated with LIM2[ENSG00000105370.3], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
Details of LIM2[ENSG00000105370.3]
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Genomic Location chr19:51883163-51891214[-]
TSS 51891214
Gene Name LIM2
Ensembl ID ENSG00000105370.3
ENTREZID 3982
Uniprot
P55344
Protein Name
Lens fiber membrane intrinsic protein
Lens intrinsic membrane protein 2
Expression levels of LIM2[ENSG00000105370.3]
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