EnhancerDB
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Enhancers that regulate RAB5C[ENSG00000108774.10]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 40204312 40211355 enh48034 40307035 95680
Neural Stem Cells (H9) Thymus Embryonic Stem Cell Line (H1-hESC)
chr17 40215698 40216046 vista24810 40307035 90989
VISTA
chr17 40230685 40236355 enh17158 40307035 70680
Placenta Cervix (HeLa-S3)
chr17 40237425 40242555 enh92724 40307035 64480
Liver (HepG2)
chr17 40240476 40240486 vista24811 40307035 66549
VISTA
chr17 40266825 40270975 enh4411 40307035 36060
Blood (Karpas-422)
chr17 40282305 40288075 enh88293 40307035 18960
Pancreas Thyroid Uterus Stomach
chr17 40292394 40297395 enh32194 40307035 9640
Epithelial (MCF-7) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (Myoblast) Pancreas Muscle (Myotube) Heart
chr17 40377585 40381735 enh4412 40307035 70550
Blood (Karpas-422)
chr17 40385005 40389155 enh4413 40307035 77970
Blood (Karpas-422)
chr17 40390345 40414201 enh4414 40307035 83310
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Heart
chr17 40400517 40401003 vista24812 40307035 93482
VISTA
Transcript facotrs that regulate RAB5C[ENSG00000108774.10]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with RAB5C[ENSG00000108774.10], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 40293467 rs9889618 C T 0 Breast 0.057344 4876697
chr17 40287101 rs11869069 C G 0 Spleen 0.104726 4876672
chr17 39684598 rs56051972 C G 592396 Ovary 0.365983 4873234
chr17 39833526 rs59421063 A G 443468 Uterus 0.29646 4874566
chr17 40284191 rs9915255 C T 0 Lung 7.4376e-08 4876644
Details of RAB5C[ENSG00000108774.10]
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Genomic Location chr17:40276994-40307035[-]
TSS 40307035
Gene Name RAB5C
Ensembl ID ENSG00000108774.10
ENTREZID 5878
Uniprot
A0A024R1U4
P51148
Protein Name
isoform CRA_a
member RAS oncogene family
RAB5C
Ras-related protein Rab-5C
Expression levels of RAB5C[ENSG00000108774.10]
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