EnhancerDB
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Enhancers that regulate LRRC59[ENSG00000108829.9]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 48372711 48387355 enh44449 48474914 87559
Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Muscle (Myotube) Neural Stem Cells (H9) Stomach
chr17 48386710 48386950 vista25112 48474914 87964
VISTA
chr17 48387705 48400939 enh58763 48474914 73975
Skin (Keratinocyte) Prostate (RWPE1) Esophagus Stomach Uterus Epithelial (MCF-7)
chr17 48403515 48413115 enh17217 48474914 61799
Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Placenta Muscle (Myoblast) Stomach
chr17 48421685 48421964 vista25113 48474914 52950
VISTA
chr17 48467638 48467952 vista25114 48474914 6962
VISTA
chr17 48482105 48487455 enh101503 48474914 7191
Thyroid
chr17 48504245 48510855 enh17218 48474914 29331
Esophagus Placenta Liver (HepG2) Epithelial (MCF-7)
chr17 48504874 48504976 vista25115 48474914 29960
VISTA
chr17 48515685 48532515 enh17219 48474914 40771
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Stomach Muscle (A673) Placenta Thyroid Lung (PC-9) Pancreas Epithelial (MCF-7)
chr17 48533125 48537275 enh81218 48474914 58211
Prostate (PC-3)
chr17 48553725 48559075 enh99431 48474914 78811
Uterus
chr17 48569165 48580715 enh86256 48474914 94251
Stomach Colon (HCT116) Cervix (HeLa-S3) Lung (PC-9)
Transcript facotrs that regulate LRRC59[ENSG00000108829.9]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with LRRC59[ENSG00000108829.9], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 49243859 rs115848216 G A 768945 Esophagus 0.223501 4928647
chr17 48937773 rs118035725 A C 462859 Heart 0.0665575 4926325
chr17 48033589 rs73989048 C G 418831 Pancreas 0.277702 4919492
chr17 48002885 rs74440765 T G 449535 Spleen 0.447996 4919083
chr17 48386025 rs4794131 C T 66395 Uterus 0.400234 4922478
chr17 48133463 rs16970080 G C 318957 Thyroid 0.100648 4920625
chr17 48898594 rs150787202 C T 423680 Liver 0.275477 4925915
chr17 47591703 rs741072 T C 860717 Lung 0.00812132 4916387
Details of LRRC59[ENSG00000108829.9]
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Genomic Location chr17:48452420-48474914[-]
TSS 48474914
Gene Name LRRC59
Ensembl ID ENSG00000108829.9
ENTREZID 55379
Uniprot
Q96AG4
Protein Name
Leucine-rich repeat-containing protein 59
Expression levels of LRRC59[ENSG00000108829.9]
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