EnhancerDB
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Enhancers that regulate EFTUD2[ENSG00000108883.8]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 42876736 42881579 enh65043 42977030 95451
Uterus Heart
chr17 42894605 42906230 enh32204 42977030 70800
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Colon (HCT116) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus
chr17 42919802 42920006 vista24900 42977030 57024
VISTA
chr17 42964525 42969055 enh65044 42977030 7975
Liver (HepG2) Heart
chr17 42981485 42987067 enh32205 42977030 4455
Bone Marrow (K562) Astrocyte Bone (Osteoblast)
chr17 43015545 43021615 enh58759 42977030 38515
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Bone (Osteoblast) Colon (HCT116) Lung (PC-9) Pancreas
chr17 43018379 43018606 vista24901 42977030 41349
VISTA
chr17 43034960 43035346 vista24902 42977030 57930
VISTA
chr17 43051357 43067175 enh44433 42977030 74327
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Esophagus Bone (Osteoblast) Lung Stomach Muscle (A673) Embryonic Stem Cell Line (H1-hESC) Pancreas Spleen Muscle (Myotube) Uterus Heart
chr17 43053342 43053729 vista24903 42977030 76312
VISTA
chr17 43061310 43061333 vista24904 42977030 84280
VISTA
chr17 43071808 43075918 enh44434 42977030 94778
Muscle (Myotube)
Transcript facotrs that regulate EFTUD2[ENSG00000108883.8]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr17 42981645 42981666 REST JASPAR yes 42977030 4615 54418086
chr17 42981646 42981661 HNF4G JASPAR yes 42977030 4616 54418087
chr17 42981646 42981665 REST JASPAR yes 42977030 4616 54418088
chr17 42981647 42981662 HNF4A JASPAR yes 42977030 4617 54418089
chr17 42981686 42981690 LFA1 TRANSFAC yes 42977030 4656 54418090
chr17 42981700 42981719 CTCF JASPAR yes 42977030 4670 54418091
chr17 42981707 42981722 STAT1 JASPAR yes 42977030 4677 54418092
chr17 42981709 42981720 STAT1 JASPAR yes 42977030 4679 54418093
chr17 42981709 42981720 STAT3 JASPAR yes 42977030 4679 54418094
chr17 42981710 42981718 STAT6 TRANSFAC yes 42977030 4680 54418095
chr17 42981721 42981735 GLIS2 JASPAR yes 42977030 4691 54418096
chr17 42981721 42981735 GLIS3 JASPAR yes 42977030 4691 54418097
chr17 42981748 42981753 TFAP2A TRANSFAC yes 42977030 4718 54418098
chr17 42981748 42981754 MZF1 JASPAR yes 42977030 4718 54418099
chr17 42981797 42981803 MZF1 JASPAR yes 42977030 4767 54418100
chr17 42981850 42981859 NFIX JASPAR yes 42977030 4820 54418101
chr17 42981850 42981860 NFIA JASPAR yes 42977030 4820 54418102
chr17 42981852 42981858 NFIC JASPAR yes 42977030 4822 54418103
chr17 42981856 42981861 ETS2 TRANSFAC yes 42977030 4826 54418104
chr17 42981858 42981877 PAX5 JASPAR yes 42977030 4828 54418105
chr17 42981863 42981884 REST JASPAR yes 42977030 4833 54418106
chr17 42981864 42981883 REST JASPAR yes 42977030 4834 54418107
chr17 42981872 42981887 HNF4A JASPAR yes 42977030 4842 54418108
chr17 42981879 42981891 GLI2 JASPAR yes 42977030 4849 54418109
chr17 42981927 42981942 HNF4G JASPAR yes 42977030 4897 54418110
chr17 42981928 42981943 HNF4A JASPAR yes 42977030 4898 54418111
chr17 42981932 42981938 SOX10 JASPAR yes 42977030 4902 54418112
chr17 42981945 42981951 MAZ TRANSFAC yes 42977030 4915 54418113
chr17 42981959 42981965 YY1 JASPAR yes 42977030 4929 54418114
chr17 42981962 42981978 POU4F2 JASPAR yes 42977030 4932 54418115
chr17 42981962 42981978 POU4F3 JASPAR yes 42977030 4932 54418116
chr17 42981964 42981968 YY1 TRANSFAC yes 42977030 4934 54418117
chr17 42981964 42981978 POU4F1 JASPAR yes 42977030 4934 54418118
chr17 42981967 42981970 MYB TRANSFAC yes 42977030 4937 54418119
chr17 42981984 42982004 ESR1 JASPAR yes 42977030 4954 54418120
chr17 42981985 42981989 LFA1 TRANSFAC yes 42977030 4955 54418121
chr17 42982005 42982015 ID4 JASPAR yes 42977030 4975 54418122
chr17 42982005 42982015 TCF4 JASPAR yes 42977030 4975 54418123
SNPs associated with EFTUD2[ENSG00000108883.8], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 42872361 rs730818 C T 54950 Esophagus 0.0010094 4891534
chr17 42981654 rs3826425 A G 4624 Heart 0.253972 4892117
chr17 42293628 rs79728446 G A 633683 Heart 0.388282 4888580
chr17 42873231 rs4792956 C T 54080 Breast 0.0510466 4891544
chr17 42866643 rs116482507 C T 60668 Ovary 0.332808 4891436
chr17 43658409 rs769375 G A 681379 Thyroid 0.0961557 4896460
Details of EFTUD2[ENSG00000108883.8]
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Genomic Location chr17:42927311-42977030[-]
TSS 42977030
Gene Name EFTUD2
Ensembl ID ENSG00000108883.8
ENTREZID 9343
Uniprot
Q15029
B3KX19
Protein Name
116 kDa U5 small nuclear ribonucleoprotein component
Expression levels of EFTUD2[ENSG00000108883.8]
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